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FASTA Sequence PDB Format mmCIF Format
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8GPJ

Hiv-1 env x16 ufo in complex with 8anc195 fab

PDB DOI: 10.2210/pdb8gpj/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens

Deposited: 2022-08-26
Deposition Author(s): Niu, J. , Xu, Y.W. , Yang, B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.5 Å

Literature

Hiv-1 env x16 ufo in complex with 8anc195 fab

Niu, J. , Xu, Y.W. , Yang, B.

Primary Citation of Related Structures: 8GPJ


Proteins
Molecule Chains Sequence Length Organism Sequence
8ANC195 Fab heavy chain A 235 Homo Sapiens QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKDLTSDDTAVYFCTTTSTYDKWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
8ANC195 Fab heavy chain D 235 Homo Sapiens QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKDLTSDDTAVYFCTTTSTYDKWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
8ANC195 Fab heavy chain H 235 Homo Sapiens QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKDLTSDDTAVYFCTTTSTYDKWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
8ANC195 Fab light chain C 215 Homo Sapiens DIQMTQSPSTLSASIGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFSGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
8ANC195 Fab light chain E 215 Homo Sapiens DIQMTQSPSTLSASIGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFSGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
8ANC195 Fab light chain L 215 Homo Sapiens DIQMTQSPSTLSASIGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFSGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
X16 UFO gp41 U 624 Homo Sapiens NLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEMVLENVTENFNMWKNEMVNQMHEDVISLWDQSLKPCVKLTPLCVTLDCTTVNSNSSSNSSNSSGNSNSTLEDMQEMKNCSFNTTTELRDKKQKVYALFYKLDIVPLSNNSSEYRLINCNTSAITQACPKVSFDPIPIHYCTPAGYALLKCNDKRFNGTGPCHNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIIVRSENLTNNVKTIIVHLNKSVEIVCTRPGNNTRKSIRIGPGQTFYATGDIIGDIRQAHCNISRGDWEETLHNVRKNLAEHFQNKTIQFASSSGGDLEITTHSFNCRGEFFYCNTSGLFNSTYMPNSTFNGTESNLTITIPCRIKQIINMWQEVGRAMYAPPIAGNITCKSNITGLLLVRDGGKESNSTEIFRPGGGDMRDNWRSELYKYKVVEIKPLGVAPTECKRRVVEGGGGSGGGGSAVGIGAVFLGFLGVAGSTMGAASVALTVQARQLLSGNPDWLPDMTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICCTAVPWNSSWSNKSQTEIWNNMTWMQWDEEISNYTATIYRLLEVSQNQQERNEKDLLALD
X16 UFO gp41 V 624 Homo Sapiens NLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEMVLENVTENFNMWKNEMVNQMHEDVISLWDQSLKPCVKLTPLCVTLDCTTVNSNSSSNSSNSSGNSNSTLEDMQEMKNCSFNTTTELRDKKQKVYALFYKLDIVPLSNNSSEYRLINCNTSAITQACPKVSFDPIPIHYCTPAGYALLKCNDKRFNGTGPCHNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIIVRSENLTNNVKTIIVHLNKSVEIVCTRPGNNTRKSIRIGPGQTFYATGDIIGDIRQAHCNISRGDWEETLHNVRKNLAEHFQNKTIQFASSSGGDLEITTHSFNCRGEFFYCNTSGLFNSTYMPNSTFNGTESNLTITIPCRIKQIINMWQEVGRAMYAPPIAGNITCKSNITGLLLVRDGGKESNSTEIFRPGGGDMRDNWRSELYKYKVVEIKPLGVAPTECKRRVVEGGGGSGGGGSAVGIGAVFLGFLGVAGSTMGAASVALTVQARQLLSGNPDWLPDMTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICCTAVPWNSSWSNKSQTEIWNNMTWMQWDEEISNYTATIYRLLEVSQNQQERNEKDLLALD
X16 UFO gp41 W 624 Homo Sapiens NLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEMVLENVTENFNMWKNEMVNQMHEDVISLWDQSLKPCVKLTPLCVTLDCTTVNSNSSSNSSNSSGNSNSTLEDMQEMKNCSFNTTTELRDKKQKVYALFYKLDIVPLSNNSSEYRLINCNTSAITQACPKVSFDPIPIHYCTPAGYALLKCNDKRFNGTGPCHNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIIVRSENLTNNVKTIIVHLNKSVEIVCTRPGNNTRKSIRIGPGQTFYATGDIIGDIRQAHCNISRGDWEETLHNVRKNLAEHFQNKTIQFASSSGGDLEITTHSFNCRGEFFYCNTSGLFNSTYMPNSTFNGTESNLTITIPCRIKQIINMWQEVGRAMYAPPIAGNITCKSNITGLLLVRDGGKESNSTEIFRPGGGDMRDNWRSELYKYKVVEIKPLGVAPTECKRRVVEGGGGSGGGGSAVGIGAVFLGFLGVAGSTMGAASVALTVQARQLLSGNPDWLPDMTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICCTAVPWNSSWSNKSQTEIWNNMTWMQWDEEISNYTATIYRLLEVSQNQQERNEKDLLALD
X16 UFO gp41 X 624 Homo Sapiens NLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEMVLENVTENFNMWKNEMVNQMHEDVISLWDQSLKPCVKLTPLCVTLDCTTVNSNSSSNSSNSSGNSNSTLEDMQEMKNCSFNTTTELRDKKQKVYALFYKLDIVPLSNNSSEYRLINCNTSAITQACPKVSFDPIPIHYCTPAGYALLKCNDKRFNGTGPCHNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIIVRSENLTNNVKTIIVHLNKSVEIVCTRPGNNTRKSIRIGPGQTFYATGDIIGDIRQAHCNISRGDWEETLHNVRKNLAEHFQNKTIQFASSSGGDLEITTHSFNCRGEFFYCNTSGLFNSTYMPNSTFNGTESNLTITIPCRIKQIINMWQEVGRAMYAPPIAGNITCKSNITGLLLVRDGGKESNSTEIFRPGGGDMRDNWRSELYKYKVVEIKPLGVAPTECKRRVVEGGGGSGGGGSAVGIGAVFLGFLGVAGSTMGAASVALTVQARQLLSGNPDWLPDMTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICCTAVPWNSSWSNKSQTEIWNNMTWMQWDEEISNYTATIYRLLEVSQNQQERNEKDLLALD
X16 UFO gp41 Y 624 Homo Sapiens NLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEMVLENVTENFNMWKNEMVNQMHEDVISLWDQSLKPCVKLTPLCVTLDCTTVNSNSSSNSSNSSGNSNSTLEDMQEMKNCSFNTTTELRDKKQKVYALFYKLDIVPLSNNSSEYRLINCNTSAITQACPKVSFDPIPIHYCTPAGYALLKCNDKRFNGTGPCHNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIIVRSENLTNNVKTIIVHLNKSVEIVCTRPGNNTRKSIRIGPGQTFYATGDIIGDIRQAHCNISRGDWEETLHNVRKNLAEHFQNKTIQFASSSGGDLEITTHSFNCRGEFFYCNTSGLFNSTYMPNSTFNGTESNLTITIPCRIKQIINMWQEVGRAMYAPPIAGNITCKSNITGLLLVRDGGKESNSTEIFRPGGGDMRDNWRSELYKYKVVEIKPLGVAPTECKRRVVEGGGGSGGGGSAVGIGAVFLGFLGVAGSTMGAASVALTVQARQLLSGNPDWLPDMTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICCTAVPWNSSWSNKSQTEIWNNMTWMQWDEEISNYTATIYRLLEVSQNQQERNEKDLLALD
X16 UFO gp41 Z 624 Homo Sapiens NLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEMVLENVTENFNMWKNEMVNQMHEDVISLWDQSLKPCVKLTPLCVTLDCTTVNSNSSSNSSNSSGNSNSTLEDMQEMKNCSFNTTTELRDKKQKVYALFYKLDIVPLSNNSSEYRLINCNTSAITQACPKVSFDPIPIHYCTPAGYALLKCNDKRFNGTGPCHNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIIVRSENLTNNVKTIIVHLNKSVEIVCTRPGNNTRKSIRIGPGQTFYATGDIIGDIRQAHCNISRGDWEETLHNVRKNLAEHFQNKTIQFASSSGGDLEITTHSFNCRGEFFYCNTSGLFNSTYMPNSTFNGTESNLTITIPCRIKQIINMWQEVGRAMYAPPIAGNITCKSNITGLLLVRDGGKESNSTEIFRPGGGDMRDNWRSELYKYKVVEIKPLGVAPTECKRRVVEGGGGSGGGGSAVGIGAVFLGFLGVAGSTMGAASVALTVQARQLLSGNPDWLPDMTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICCTAVPWNSSWSNKSQTEIWNNMTWMQWDEEISNYTATIYRLLEVSQNQQERNEKDLLALD
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-08-26
Deposition Author(s): Niu, J. , Xu, Y.W. , Yang, B.