8GLK
The type 9 secretion system dgldl peak ii, nuca substrate bound complex
PDB DOI: 10.2210/pdb8glk/pdb
Classification: MEMBRANE PROTEIN Organism(s): Flavobacterium Johnsoniae
Deposited: 2023-03-22 Deposition Author(s): Deme, J.C. , Lea, S.M.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.8 Å
The type 9 secretion system dgldl peak ii, nuca substrate bound complex
Primary Citation of Related Structures: 8GLK
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Endonuclease I | D | 75 | Flavobacterium Johnsoniae | EIVIFPNPSDGNFNIGLNNFNFPYSLEIFSFTGQKVFEKQNASDSIISVSYLPSGIYIVKIEKDSKTTIKKIIIN |
| Protein involved in gliding motility SprA | A | 2403 | Flavobacterium Johnsoniae | MRKICIFLLVLFCGNVLRSQVKPAVQDTTKTQFSVGKMELENPPSILSAYKYDPITDRYIYTTSVDGFSIDYPLVLTPKEYEDLLLKESRRDYFRKKMDAIDGKKTGAEAAKKDLLPRYYINSSLFESIFGSNTIDVKPTGSVEMDLGVRYTKQDNPAFSPRNRSSLTFDFDQRISMSLMGKIGTRLEVNANYDTQSTFAFQNLFKLAYTPSEDDIIQKVEVGNVSMPLNSTLIRGAQSLFGVKTQLQFGRTTITGVFSEQKSQTKSVVAENGGTVQNFDLYALDYDNDRHFFLSQYFRNKYDVSLKNYPFIDSRVQITRLEVWVTNKQNRVTTTGGGNNLRNIIALQDLGEAQVSGVPDNEVVVISSTAGFFNNPIDSPTSNTNNKYDPATIGQAGSFLNSNIREIVTAKSGFNNTNVSEATDYSVLENARKLTTNEYTFNPQLGYISLQQRLANDEILAVAFEYTVGGKVYQVGEFGSDGVDATVVTGNNSSNQAIITQSLVLKMLKSNLTNVKNPVWNLMMKNVYQIPQAYQIKQDDFRLNILYTDPSPINYITPVQGSSFPPNPAPDSKVEQTPLLNVFNLDRLNYNNDPQAGGDGFFDYIPGVTVDVQNGRVIFTTKEPFGELIFNKLQTGAGESYNDPTTYNANQQKYVFRNMYRNTQAGALQDSDKNKFLLRGKYKSSGSNGIPIGAFNVPQGSVVVTAAGRVLVEGIDYSVDYQLGRVQILDPSLQASNTPIEVSLENNSIFGQQTRRFMGFNIEHKISDKFVIGGTYLKMTERPFTQKSTYGQESVNNTIFGFNGNYSTEVPFLTRLANKLPNIDTDVPSNLSIRGEVAFLRPDAPKASDFQGEATIYVDDFEGSQSTIDMRSAYAWSLASTPFITSINDNTFNANSNTLEYGFKRAKLSWYTIDPVFYSSKPSGISNDDLSLNTTRRIYSRELYPNTDIAQGQIQVVNTLDLTYYPGERGPYNNNPSFGASNPSANFGGIMRALNSTNFEQGNVEYIQFWVLDPYVGNGESPATNAGKIYFNLGEISEDVLKDGRKQYENGLGPDQVMVNPQPLWGDVPASQSLIYAFDTNPDNRKNQDVGLDGLPSSREGSIYTNYAGEADPAGDDYTYYLNADGGVLERYKNYNGTEGNSAVSINDPNRGSTTLPDVEDINRDNTMSTINAYYEYSIDVKPGMQVGENYITDIREVTNVDLPNGGTTNARWIQFKIPVSQPQNTIGNITDFRSIRFMRMFMTGFNSQMTVRFGALDLVRGEWRRYTGTLDANDQNPDDDGVEFDVAAVNIQENGTKCPVNYVMPPGVQREQLYNNNTVINQNEQALAVRIGGAGLQYQDSRAVFKNVSVDMRQYKKLKMFLHAESLPNQPTLEDDEMVGFIRFGNDFTQNFYQVEIPLKVTKTGGSCSISPDLVWMDDNSIDLALDLLTRMKIKAMSIDINSSKRDVNGIYYPDNDPDLEGGDGDGKLTLGIKGNPNFGLVRNLMVGVKSRADHKDIKGEVWFNELRLADLENKGGMAAILNVDTNMADFATVSATGRKSTIGFGSLEQGANERDREDVQQYNIVTNLNLGKLLPKKWGINLPFNYAIGEEVITPEYDPFNQDIKLDQLIRETTDQAEKDNIRTRAIDYTKRKSINFIGVRKDRAPEQKPHVYDIENFTFSQSYNQVERHDYEVADYEDEQSNSAVNYAYTFQPKEVVPFKSTKFMKKSEYWKLLSDFNFNYLPSNISFNTNILRQSNRQQFREVEVEGIGLDPLYRRNFAFNYQYGFGFNLTKSLKLNYSATSNNIVRNFLNDDNSPKEDFNIWDDYLDIGTPNQHAQQLVLNYDIPINKIPIFGFVKASYSYTADYMWQRSSTAFSEYEDPNGTVYDLGNTIQNSNSNTLTTTLNMNTLYKYLGLTPGAKKTAKPKTAAPPKPGEKIVNTAKPVVSSSPFYDGLIGVLTSIKNVQINYTKNSGTVLPGYTPSVGFLGTSKPSLGFVFGSQDDVRYEAAKRGWLTTYQDFNQSFTQVSNKLLKVTANIDLLPDLKVDLSMDRSYSENTSEQYSVDPSTNEYKPLSPYTYGMFSISTVMIKTAFSPSDETQSAAFDDFRSNRLIIANRLAEGHYGSGVAIPRYGDANNPIPAETDPNYAVYTANQGYPIGYTKSNQAVLLPAFLAAYTGSDASSSSTNIFRSFPIPNWSIKYNGLMRYKYFKDKFKRFSLQHNYRASYTINQFRSNFDYNSSPKVQDVNTNFYNEIIMSNVNLVEQFSPLIRMDFELKSSLRVLSEIKKDRALSMSFDNNLLTEVKGMEYIIGLGYRFKDVIFSSRLADNPTGIIKSDINIKADFSLRNNETLVRYLDYDNNQLAAGQNIWSLKLTADYSFSKNLTAIFYYDHSFSKAVISTSFPLTNIRSGFTLRYNFGN |
| Peptidyl-prolyl cis-trans isomerase | B | 176 | Flavobacterium Johnsoniae | MKQLLTALLSLTLFISCSKDKDEVKDYTAENEKEIVDYLAQNNLTAQRTNSGLYYIITKEGSSESEGENPGEEENTGEGENTEENENDGHPTLNSNITVIYKGYFTNGKVFDESTEGVSYSLRTLIPGWKEGIPLLKSGGEIQLFVPAHLGYGSNGNKTVPGGAVLIFEITLVSVN |
| Type IX secretion system protein PorV domain-containing protein | F | 402 | Flavobacterium Johnsoniae | MKKISLLLICLLITTFAKAQDIERPITTGVPFLLVAADARAAGLGDQGVATSSDVFSQQWNPAKYAFAEDAQGLSISYTPYLTDLANDISLGQVTYYNKINDRSAFAGSFRYFGFGGIELRQTGDPNEPTREVNPNEFALDGSYSLKLSETFSMAVAARYIRSNLKVATEEIDASAAGSFAVDVAGFYQSEEIAYSDFNGRWRAGFNIQNLGPKISYDHDDLSANFLPANLRVGGGFDFIFDDYNKLGVSLELTKLLVPTPPGPGTPYDANGDGDFTDPGDISQSQADEANYKKYKDIGWVSGIFKSFGDAPGGFSEELKEITYSAAAEYMYQDAFAMRLGYYHESPMKGAKQFFSLGAGFKYSMIKVDVSYLFSASKVKNPLENTLRFSLTFNFGDKYETY |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-03-22 Deposition Author(s): Deme, J.C. , Lea, S.M.