PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8GAT

Structure of human nds.1 fab and 1g01 fab in complex with influenza virus neuraminidase from a/indiana/10/2011 (h3n2v), based on consensus cryo-em map with only fab 1g01 resolved

PDB DOI: 10.2210/pdb8gat/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Influenza A Virus (A/Indiana/10/2011(H3N2))

Deposited: 2023-02-23
Deposition Author(s): Kanekiyo, M. , Kwong, P.D. , Lederhofer, J. , Tsybovsky, Y.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.0 Å

Literature

Structure of human nds.1 fab and 1g01 fab in complex with influenza virus neuraminidase from a/indiana/10/2011 (h3n2v), based on consensus cryo-em map with only fab 1g01 resolved

Kanekiyo, M. , Kwong, P.D. , Lederhofer, J. , Tsybovsky, Y.

Primary Citation of Related Structures: 8GAT


Proteins
Molecule Chains Sequence Length Organism Sequence
Vasodilator-stimulated phosphoprotein, Neuraminidase chimera A 466 Homo Sapiens , Influenza A Virus (A/Indiana/10/2011(H3N2)) MEFGLSWIFLAAILKGVQCADPHHHHHHSSSDYSDLQRVKQELLEEVKKELQKVKEEIIEAFVQELRKRGSLVPRGSGGEYRNWSKPQCNITGFAPFSKDNSIRLSAGGDIWVTREPYVSCDPDKCYQFALGQGTTLNNGHSNNTVHDRTPYRTLLMNELGVPFHLGTRQVCMAWSSSSCHDGKAWLHVCITGNDNNATASFIYNGRLVDSIGSWSKNILRTQESECVCINGTCTVVMTDGSASGKADTKILFVEEGKIVHISTLSGSAQHVEECSCYPRFPGVRCVCRDNWKGSNRPIVDINVKNYSIVSSYVCSGLVGDTPRKSDSVSSSYCLDPNNEKGGHGVKGWAFDDGNDVWMGRTINETLRLGYETFKVIEGWSKANSKLQTNRQVIVEKGDRSGYSGIFSVEGKSCINRCFYVELIRGRKEETKVWWTSNSIVVFCGTSGTYGTGSWPDGADINLMPI
Fab 1G01, heavy chain M 240 Homo Sapiens , Influenza A Virus (A/Indiana/10/2011(H3N2)) DEVQLVESGGRALRPGGSLRLSCAASGFKFDDYAMSWVRQVPGKGLEFVSGLNWNGDITAYTDSVKGRFTVSRDNAKNSLYLHINSPKPEDTALYYCARTSSWGDYTRGPEPKITWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCHHHHHH
Fab 1G01, light chain N 216 Homo Sapiens , Influenza A Virus (A/Indiana/10/2011(H3N2)) DDIQLTQSPSFLSASVGDRITITCRASQGIDGYLAWYQQRPGKAPNLLIYAASLLQSGVPSRFSGSGYGTEFTLTISSLQPEDFATYYCQHLDSYPLFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-02-23
Deposition Author(s): Kanekiyo, M. , Kwong, P.D. , Lederhofer, J. , Tsybovsky, Y.