8G86
Human oct4 bound to nucleosome with human nmatn1 sequence (focused refinement of nucleosome)
PDB DOI: 10.2210/pdb8g86/pdb
Classification: DNA BINDING PROTEIN/DNA Organism(s): Mucilaginibacter Paludis Dsm 18603 , Brucella Melitensis , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2023-02-17 Deposition Author(s): Bilokapic, S. , Du, Y. , Halic, M. , Malik, D. , Sinha, K.K.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.3 Å
Human oct4 bound to nucleosome with human nmatn1 sequence (focused refinement of nucleosome)
Bilokapic, S. , Du, Y. , Halic, M. , Malik, D. , Sinha, K.K.
Primary Citation of Related Structures: 8G86
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| nMatn1 DNA (top stand) | i | 186 | NA | ACATGCACACATGCTAATATATGCACACAATGCACACAGGTTAATATATACACATACACACACATGCACACACACGTGCACACATATATGCACATGCATGCACACACGTATATGCACACACATGCACATGCATGCGCACATAGTCACACACATGCACACATTAGCATATGCATACACATACATGCA |
| nMatn1 DNA (bottom strand) | j | 186 | NA | TGCATGTATGTGTATGCATATGCTAATGTGTGCATGTGTGTGACTATGTGCGCATGCATGTGCATGTGTGTGCATATACGTGTGTGCATGCATGTGCATATATGTGTGCACGTGTGTGTGCATGTGTGTGTATGTGTATATATTAACCTGTGTGCATTGTGTGCATATATTAGCATGTGTGCATGT |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-02-17 Deposition Author(s): Bilokapic, S. , Du, Y. , Halic, M. , Malik, D. , Sinha, K.K.