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FASTA Sequence PDB Format mmCIF Format
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8FXI

Cryo-em structure of stanieria sp. cpha2 in complex with adpcp and 4x(beta-asp-arg)

PDB DOI: 10.2210/pdb8fxi/pdb

Classification: LIGASE
Organism(s): Stanieria Sp. Nies-3757 , Synthetic Construct

Deposited: 2023-01-24
Deposition Author(s): Markus, L.M. , Schmeing, T.M. , Sharon, I. , Strauss, M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.7 Å

8fxi
Literature

Cryo-em structure of stanieria sp. cpha2 in complex with adpcp and 4x(beta-asp-arg)

Markus, L.M. , Schmeing, T.M. , Sharon, I. , Strauss, M.

Primary Citation of Related Structures: 8FXI


Proteins
Molecule Chains Sequence Length Organism Sequence
RimK domain-containing protein ATP-grasp A 642 Stanieria Sp. Nies-3757 , Synthetic Construct MLTKQAVEPVRINARTTDVFDIFNVKQYVGANPYLNQAALVFDFAFTESYQPLPIENYLAVVGDRYPRLKEIEYQSYAELFASTVAEVNKLEMDLHLKGWNVKPIEEINRIAIESLHHRTTKEVVYCVWDWFEFITQGEEFDLSKQIAILQQLFRNSVYGGPTVYALLRTANEKHIPAFYLWDEGLMQYGYGKQQVRGIATTFDVDSHIDSDFTTQKDDCKKFLQELGFPVPQGDVVFSLAEAKEVAAEIGYPVAVKPVAGHKGIGVTADVQDEIELEAAYDRAVAGIPLEEKICIIVENSIAGHDYRLLCVNGRFVAATERKPAYVVGDGYSTIAELIEKENFSPNRSDTPTSPMGKIRTDEAMHLYLEEQGLDLDSVIDRDRTIYLRKVANLSSGGFSIDATNRVHPDNIILAQDIAQHFRLTCLGIDIITNDIGRSWKETSFGIIEINAAPGVYMHLKPAIGEPVDVTARILETFFETEKNARIPIITFNRVSIRQLQKLSDRILMSHPDWTIGAVCREGILINRSEKILNRHYNTNVLNLLRNPKLDLLIAEYDEDALEAEGMFYHGSNLVVLEDPSEIEMILTRDVFSDSTVIIKQGREITIKRKGLLEQYELEAEELIEQVYLKEIGTISENLYFQ
RimK domain-containing protein ATP-grasp B 642 Stanieria Sp. Nies-3757 , Synthetic Construct MLTKQAVEPVRINARTTDVFDIFNVKQYVGANPYLNQAALVFDFAFTESYQPLPIENYLAVVGDRYPRLKEIEYQSYAELFASTVAEVNKLEMDLHLKGWNVKPIEEINRIAIESLHHRTTKEVVYCVWDWFEFITQGEEFDLSKQIAILQQLFRNSVYGGPTVYALLRTANEKHIPAFYLWDEGLMQYGYGKQQVRGIATTFDVDSHIDSDFTTQKDDCKKFLQELGFPVPQGDVVFSLAEAKEVAAEIGYPVAVKPVAGHKGIGVTADVQDEIELEAAYDRAVAGIPLEEKICIIVENSIAGHDYRLLCVNGRFVAATERKPAYVVGDGYSTIAELIEKENFSPNRSDTPTSPMGKIRTDEAMHLYLEEQGLDLDSVIDRDRTIYLRKVANLSSGGFSIDATNRVHPDNIILAQDIAQHFRLTCLGIDIITNDIGRSWKETSFGIIEINAAPGVYMHLKPAIGEPVDVTARILETFFETEKNARIPIITFNRVSIRQLQKLSDRILMSHPDWTIGAVCREGILINRSEKILNRHYNTNVLNLLRNPKLDLLIAEYDEDALEAEGMFYHGSNLVVLEDPSEIEMILTRDVFSDSTVIIKQGREITIKRKGLLEQYELEAEELIEQVYLKEIGTISENLYFQ
RimK domain-containing protein ATP-grasp C 642 Stanieria Sp. Nies-3757 , Synthetic Construct MLTKQAVEPVRINARTTDVFDIFNVKQYVGANPYLNQAALVFDFAFTESYQPLPIENYLAVVGDRYPRLKEIEYQSYAELFASTVAEVNKLEMDLHLKGWNVKPIEEINRIAIESLHHRTTKEVVYCVWDWFEFITQGEEFDLSKQIAILQQLFRNSVYGGPTVYALLRTANEKHIPAFYLWDEGLMQYGYGKQQVRGIATTFDVDSHIDSDFTTQKDDCKKFLQELGFPVPQGDVVFSLAEAKEVAAEIGYPVAVKPVAGHKGIGVTADVQDEIELEAAYDRAVAGIPLEEKICIIVENSIAGHDYRLLCVNGRFVAATERKPAYVVGDGYSTIAELIEKENFSPNRSDTPTSPMGKIRTDEAMHLYLEEQGLDLDSVIDRDRTIYLRKVANLSSGGFSIDATNRVHPDNIILAQDIAQHFRLTCLGIDIITNDIGRSWKETSFGIIEINAAPGVYMHLKPAIGEPVDVTARILETFFETEKNARIPIITFNRVSIRQLQKLSDRILMSHPDWTIGAVCREGILINRSEKILNRHYNTNVLNLLRNPKLDLLIAEYDEDALEAEGMFYHGSNLVVLEDPSEIEMILTRDVFSDSTVIIKQGREITIKRKGLLEQYELEAEELIEQVYLKEIGTISENLYFQ
RimK domain-containing protein ATP-grasp D 642 Stanieria Sp. Nies-3757 , Synthetic Construct MLTKQAVEPVRINARTTDVFDIFNVKQYVGANPYLNQAALVFDFAFTESYQPLPIENYLAVVGDRYPRLKEIEYQSYAELFASTVAEVNKLEMDLHLKGWNVKPIEEINRIAIESLHHRTTKEVVYCVWDWFEFITQGEEFDLSKQIAILQQLFRNSVYGGPTVYALLRTANEKHIPAFYLWDEGLMQYGYGKQQVRGIATTFDVDSHIDSDFTTQKDDCKKFLQELGFPVPQGDVVFSLAEAKEVAAEIGYPVAVKPVAGHKGIGVTADVQDEIELEAAYDRAVAGIPLEEKICIIVENSIAGHDYRLLCVNGRFVAATERKPAYVVGDGYSTIAELIEKENFSPNRSDTPTSPMGKIRTDEAMHLYLEEQGLDLDSVIDRDRTIYLRKVANLSSGGFSIDATNRVHPDNIILAQDIAQHFRLTCLGIDIITNDIGRSWKETSFGIIEINAAPGVYMHLKPAIGEPVDVTARILETFFETEKNARIPIITFNRVSIRQLQKLSDRILMSHPDWTIGAVCREGILINRSEKILNRHYNTNVLNLLRNPKLDLLIAEYDEDALEAEGMFYHGSNLVVLEDPSEIEMILTRDVFSDSTVIIKQGREITIKRKGLLEQYELEAEELIEQVYLKEIGTISENLYFQ
RimK domain-containing protein ATP-grasp E 642 Stanieria Sp. Nies-3757 , Synthetic Construct MLTKQAVEPVRINARTTDVFDIFNVKQYVGANPYLNQAALVFDFAFTESYQPLPIENYLAVVGDRYPRLKEIEYQSYAELFASTVAEVNKLEMDLHLKGWNVKPIEEINRIAIESLHHRTTKEVVYCVWDWFEFITQGEEFDLSKQIAILQQLFRNSVYGGPTVYALLRTANEKHIPAFYLWDEGLMQYGYGKQQVRGIATTFDVDSHIDSDFTTQKDDCKKFLQELGFPVPQGDVVFSLAEAKEVAAEIGYPVAVKPVAGHKGIGVTADVQDEIELEAAYDRAVAGIPLEEKICIIVENSIAGHDYRLLCVNGRFVAATERKPAYVVGDGYSTIAELIEKENFSPNRSDTPTSPMGKIRTDEAMHLYLEEQGLDLDSVIDRDRTIYLRKVANLSSGGFSIDATNRVHPDNIILAQDIAQHFRLTCLGIDIITNDIGRSWKETSFGIIEINAAPGVYMHLKPAIGEPVDVTARILETFFETEKNARIPIITFNRVSIRQLQKLSDRILMSHPDWTIGAVCREGILINRSEKILNRHYNTNVLNLLRNPKLDLLIAEYDEDALEAEGMFYHGSNLVVLEDPSEIEMILTRDVFSDSTVIIKQGREITIKRKGLLEQYELEAEELIEQVYLKEIGTISENLYFQ
RimK domain-containing protein ATP-grasp F 642 Stanieria Sp. Nies-3757 , Synthetic Construct MLTKQAVEPVRINARTTDVFDIFNVKQYVGANPYLNQAALVFDFAFTESYQPLPIENYLAVVGDRYPRLKEIEYQSYAELFASTVAEVNKLEMDLHLKGWNVKPIEEINRIAIESLHHRTTKEVVYCVWDWFEFITQGEEFDLSKQIAILQQLFRNSVYGGPTVYALLRTANEKHIPAFYLWDEGLMQYGYGKQQVRGIATTFDVDSHIDSDFTTQKDDCKKFLQELGFPVPQGDVVFSLAEAKEVAAEIGYPVAVKPVAGHKGIGVTADVQDEIELEAAYDRAVAGIPLEEKICIIVENSIAGHDYRLLCVNGRFVAATERKPAYVVGDGYSTIAELIEKENFSPNRSDTPTSPMGKIRTDEAMHLYLEEQGLDLDSVIDRDRTIYLRKVANLSSGGFSIDATNRVHPDNIILAQDIAQHFRLTCLGIDIITNDIGRSWKETSFGIIEINAAPGVYMHLKPAIGEPVDVTARILETFFETEKNARIPIITFNRVSIRQLQKLSDRILMSHPDWTIGAVCREGILINRSEKILNRHYNTNVLNLLRNPKLDLLIAEYDEDALEAEGMFYHGSNLVVLEDPSEIEMILTRDVFSDSTVIIKQGREITIKRKGLLEQYELEAEELIEQVYLKEIGTISENLYFQ
4x(beta-Asp-Arg) G 4 Stanieria Sp. Nies-3757 , Synthetic Construct DDDD
4x(beta-Asp-Arg) H 4 Stanieria Sp. Nies-3757 , Synthetic Construct DDDD
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-01-24
Deposition Author(s): Markus, L.M. , Schmeing, T.M. , Sharon, I. , Strauss, M.