8FWM
Structure of tail-neck junction of agrobacterium phage milano
PDB DOI: 10.2210/pdb8fwm/pdb
Classification: VIRUS Organism(s): Agrobacterium Phage Milano
Deposited: 2023-01-23 Deposition Author(s): Egelman, E.H. , Esteves, N.C. , Kelly, R.J. , Kreutzberger, M.A.B. , Leiman, P.G. , Scharf, B.E. , Sebastian, A. , Sonani, R.R. , Wang, F.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.49 Å
Structure of tail-neck junction of agrobacterium phage milano
Egelman, E.H. , Esteves, N.C. , Kelly, R.J. , Kreutzberger, M.A.B. , Leiman, P.G. , Scharf, B.E. , Sebastian, A. , Sonani, R.R. , Wang, F.
Primary Citation of Related Structures: 8FWM
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Collar sheath protein, gp13 | 3 | 230 | Agrobacterium Phage Milano | MYFFSVDPRNGASKSGDVCGSCCCESISARPGEVNGVMVSYAAWSAPLRGHGLTNKTTFEIDGVSVTPPKVSNAFGRTKVGVVFEGTLSDLFPNPEGEQVEYEISELNGPSNGVVELGANGAFTYTPGALFTGVDRFWFSINGNIGEYVISVDPTTSELPQPPFTTPVYVPAARRSVDPRTHVLKFVLGVSPAAIPGDVYRLTVRQVAIDCDGNEFVHISCYDISIGSCG |
| Collar sheath protein, gp13 | D | 230 | Agrobacterium Phage Milano | MYFFSVDPRNGASKSGDVCGSCCCESISARPGEVNGVMVSYAAWSAPLRGHGLTNKTTFEIDGVSVTPPKVSNAFGRTKVGVVFEGTLSDLFPNPEGEQVEYEISELNGPSNGVVELGANGAFTYTPGALFTGVDRFWFSINGNIGEYVISVDPTTSELPQPPFTTPVYVPAARRSVDPRTHVLKFVLGVSPAAIPGDVYRLTVRQVAIDCDGNEFVHISCYDISIGSCG |
| Collar sheath protein, gp13 | E | 230 | Agrobacterium Phage Milano | MYFFSVDPRNGASKSGDVCGSCCCESISARPGEVNGVMVSYAAWSAPLRGHGLTNKTTFEIDGVSVTPPKVSNAFGRTKVGVVFEGTLSDLFPNPEGEQVEYEISELNGPSNGVVELGANGAFTYTPGALFTGVDRFWFSINGNIGEYVISVDPTTSELPQPPFTTPVYVPAARRSVDPRTHVLKFVLGVSPAAIPGDVYRLTVRQVAIDCDGNEFVHISCYDISIGSCG |
| Collar sheath protein, gp13 | F | 230 | Agrobacterium Phage Milano | MYFFSVDPRNGASKSGDVCGSCCCESISARPGEVNGVMVSYAAWSAPLRGHGLTNKTTFEIDGVSVTPPKVSNAFGRTKVGVVFEGTLSDLFPNPEGEQVEYEISELNGPSNGVVELGANGAFTYTPGALFTGVDRFWFSINGNIGEYVISVDPTTSELPQPPFTTPVYVPAARRSVDPRTHVLKFVLGVSPAAIPGDVYRLTVRQVAIDCDGNEFVHISCYDISIGSCG |
| Collar sheath protein, gp13 | G | 230 | Agrobacterium Phage Milano | MYFFSVDPRNGASKSGDVCGSCCCESISARPGEVNGVMVSYAAWSAPLRGHGLTNKTTFEIDGVSVTPPKVSNAFGRTKVGVVFEGTLSDLFPNPEGEQVEYEISELNGPSNGVVELGANGAFTYTPGALFTGVDRFWFSINGNIGEYVISVDPTTSELPQPPFTTPVYVPAARRSVDPRTHVLKFVLGVSPAAIPGDVYRLTVRQVAIDCDGNEFVHISCYDISIGSCG |
| Tail sheath protein | P | 503 | Agrobacterium Phage Milano | MAQDALSDGFVRLCIDPSLNFFGEGCKILVEGQMTDDGSATPDAVTCVTSELDIIERFGQGSVLTESLRKVFCTCKSGVSVYALPREDAAAGVKAVYTLTIAGPATTDGRVQLYMGEAEYAVDIGVDAGDTATDIAAAIVAAISPDFPYAATAAAGVITLTARNAGTIGNHLSVIYTNLGSCTSVTPEGVTVTFAQTTAGSVNPTPNDYATVVNECCFAVYVLSSDDTDWQENLRDWIRSAWDCSKPQCFGHGYVFNKGTLGQVLADGDNSAELSRLALPTTYPVLPYLTNAAYGALSACSTCNNPELNIQGQTFGLLSCINMPESCTPGWTFGEVTQLQANGFVVSGPSTTSGQGNYTSPYIYNDVTNYLRDEKNRPNATFRDASSRRLAAATGVALAEFLQQFNGLAVFTKNTNIRTGIIGTNPRLMLGKIRKWAQDNVGTLFSEFDNINEDIQLLTDFEVQPKCVGQPGIFHLNMRYRPPVRGARINVNMAPALFDNCDR |
| Tail sheath protein | Q | 503 | Agrobacterium Phage Milano | MAQDALSDGFVRLCIDPSLNFFGEGCKILVEGQMTDDGSATPDAVTCVTSELDIIERFGQGSVLTESLRKVFCTCKSGVSVYALPREDAAAGVKAVYTLTIAGPATTDGRVQLYMGEAEYAVDIGVDAGDTATDIAAAIVAAISPDFPYAATAAAGVITLTARNAGTIGNHLSVIYTNLGSCTSVTPEGVTVTFAQTTAGSVNPTPNDYATVVNECCFAVYVLSSDDTDWQENLRDWIRSAWDCSKPQCFGHGYVFNKGTLGQVLADGDNSAELSRLALPTTYPVLPYLTNAAYGALSACSTCNNPELNIQGQTFGLLSCINMPESCTPGWTFGEVTQLQANGFVVSGPSTTSGQGNYTSPYIYNDVTNYLRDEKNRPNATFRDASSRRLAAATGVALAEFLQQFNGLAVFTKNTNIRTGIIGTNPRLMLGKIRKWAQDNVGTLFSEFDNINEDIQLLTDFEVQPKCVGQPGIFHLNMRYRPPVRGARINVNMAPALFDNCDR |
| Tail sheath protein | R | 503 | Agrobacterium Phage Milano | MAQDALSDGFVRLCIDPSLNFFGEGCKILVEGQMTDDGSATPDAVTCVTSELDIIERFGQGSVLTESLRKVFCTCKSGVSVYALPREDAAAGVKAVYTLTIAGPATTDGRVQLYMGEAEYAVDIGVDAGDTATDIAAAIVAAISPDFPYAATAAAGVITLTARNAGTIGNHLSVIYTNLGSCTSVTPEGVTVTFAQTTAGSVNPTPNDYATVVNECCFAVYVLSSDDTDWQENLRDWIRSAWDCSKPQCFGHGYVFNKGTLGQVLADGDNSAELSRLALPTTYPVLPYLTNAAYGALSACSTCNNPELNIQGQTFGLLSCINMPESCTPGWTFGEVTQLQANGFVVSGPSTTSGQGNYTSPYIYNDVTNYLRDEKNRPNATFRDASSRRLAAATGVALAEFLQQFNGLAVFTKNTNIRTGIIGTNPRLMLGKIRKWAQDNVGTLFSEFDNINEDIQLLTDFEVQPKCVGQPGIFHLNMRYRPPVRGARINVNMAPALFDNCDR |
| Tail sheath protein | S | 503 | Agrobacterium Phage Milano | MAQDALSDGFVRLCIDPSLNFFGEGCKILVEGQMTDDGSATPDAVTCVTSELDIIERFGQGSVLTESLRKVFCTCKSGVSVYALPREDAAAGVKAVYTLTIAGPATTDGRVQLYMGEAEYAVDIGVDAGDTATDIAAAIVAAISPDFPYAATAAAGVITLTARNAGTIGNHLSVIYTNLGSCTSVTPEGVTVTFAQTTAGSVNPTPNDYATVVNECCFAVYVLSSDDTDWQENLRDWIRSAWDCSKPQCFGHGYVFNKGTLGQVLADGDNSAELSRLALPTTYPVLPYLTNAAYGALSACSTCNNPELNIQGQTFGLLSCINMPESCTPGWTFGEVTQLQANGFVVSGPSTTSGQGNYTSPYIYNDVTNYLRDEKNRPNATFRDASSRRLAAATGVALAEFLQQFNGLAVFTKNTNIRTGIIGTNPRLMLGKIRKWAQDNVGTLFSEFDNINEDIQLLTDFEVQPKCVGQPGIFHLNMRYRPPVRGARINVNMAPALFDNCDR |
| Tail-tube, gp21 | AV | 136 | Agrobacterium Phage Milano | MACNKQNGVKNILITFTDCDTQEVIGPISHEQPDDTLPTYKNCAWTNTALTNGYVQRSASNATMTLPVVRDLRVPLAFYQGCAQVDVQVEKFDGTVMTLTEGAVVEPEESDGRSVTMNIVASEIDELLPPGSLAAA |
| Tail-tube, gp21 | AA | 136 | Agrobacterium Phage Milano | MACNKQNGVKNILITFTDCDTQEVIGPISHEQPDDTLPTYKNCAWTNTALTNGYVQRSASNATMTLPVVRDLRVPLAFYQGCAQVDVQVEKFDGTVMTLTEGAVVEPEESDGRSVTMNIVASEIDELLPPGSLAAA |
| Tail-tube, gp21 | AE | 136 | Agrobacterium Phage Milano | MACNKQNGVKNILITFTDCDTQEVIGPISHEQPDDTLPTYKNCAWTNTALTNGYVQRSASNATMTLPVVRDLRVPLAFYQGCAQVDVQVEKFDGTVMTLTEGAVVEPEESDGRSVTMNIVASEIDELLPPGSLAAA |
| Tail-tube, gp21 | AD | 136 | Agrobacterium Phage Milano | MACNKQNGVKNILITFTDCDTQEVIGPISHEQPDDTLPTYKNCAWTNTALTNGYVQRSASNATMTLPVVRDLRVPLAFYQGCAQVDVQVEKFDGTVMTLTEGAVVEPEESDGRSVTMNIVASEIDELLPPGSLAAA |
| Tail-terminator protein, gp18 | AS | 178 | Agrobacterium Phage Milano | METKLTYGNRVTLPEFAKYIVAPAFHEIEGRAIPVTGVDDDASGTQATKLPFVLVGLRQGDTSGPATIAGNSTINLRDDFIVEFNMKKERYRDRKGGETPFFSYYDYESIRDRLFNSMIEFSGEHGITFEFVSLDISTEGDVVYIEFRFRQNYEWCETVREADTTIEAGRFSINLQGC |
| Tail-terminator protein, gp18 | AT | 178 | Agrobacterium Phage Milano | METKLTYGNRVTLPEFAKYIVAPAFHEIEGRAIPVTGVDDDASGTQATKLPFVLVGLRQGDTSGPATIAGNSTINLRDDFIVEFNMKKERYRDRKGGETPFFSYYDYESIRDRLFNSMIEFSGEHGITFEFVSLDISTEGDVVYIEFRFRQNYEWCETVREADTTIEAGRFSINLQGC |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-01-23 Deposition Author(s): Egelman, E.H. , Esteves, N.C. , Kelly, R.J. , Kreutzberger, M.A.B. , Leiman, P.G. , Scharf, B.E. , Sebastian, A. , Sonani, R.R. , Wang, F.