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8FSJ

Cryo-em structure of engineered hepatitis c virus e1e2 ectodomain in complex with antibodies ar4a, hepc74, and igh520

PDB DOI: 10.2210/pdb8fsj/pdb

Classification: VIRAL PROTEIN
Organism(s): Hepacivirus C , Homo Sapiens , Synthetic Construct

Deposited: 2023-01-10
Deposition Author(s): Metcalf, M.C. , Ofek, G.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.65 Å

Literature

Cryo-em structure of engineered hepatitis c virus e1e2 ectodomain in complex with antibodies ar4a, hepc74, and igh520

Metcalf, M.C. , Ofek, G.

Primary Citation of Related Structures: 8FSJ


Proteins
Molecule Chains Sequence Length Organism Sequence
HCV E2 ectodomain, SYNZIP2 scaffold fusion E 385 Hepacivirus C , Homo Sapiens , Synthetic Construct STHVTGGTASHTTRHFASLFSSGASQRVQLINTNGSWHINRTALNCNDSLHTGFLAALFYTHKFNASGCPERMAHCRPIDEFAQGWGPITYAEGHGSDQRPYCWHYAPRQCGTIPASQVCGPVYCFTPSPVVVGTTDRFGAPTYTWGENETDVLILNNTRPPQGNWFGCTWMNSTGFTKTCGGPPCNIGGVGNNTLTCPTDCFRKHPEATYTKCGSGPWLTPRCLVDYPYRLWHYPCTVNFTIFKVRMYVGGVEHRLNAACNWTRGERCDLQDRDRSELSPLLLSTTEWQILPCSFTTLPALSTGLIHLHQNIVDVQYLYGIGSAVVSFAIPGGLVAQLENEVASLENENETLKKKNLHKKDLIAYLEKEIANLRKKIEHHHHHH
HEPC74 heavy chain H 264 Hepacivirus C , Homo Sapiens , Synthetic Construct QVQLVQSGAEVKKPGSSVKVSCTTSGGTYINYAISWVRQAPGQGLEWVGGMSPISNTPKYAQKFQGRVTITADESTSTTYMELSSLRPEDTAVYYCARDLLKYCGGGNCHSLLVDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTAGWSHPQFEKGGGSGGGSGGSSAWSHPQFEK
HEPC74 light chain L 214 Hepacivirus C , Homo Sapiens , Synthetic Construct DIVMTQSPSTLSASVGDRVTISCRASQSISSWLAWYQQKPGRAPKLLIYKASSLETGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQHYNTYLFTFGPGTKVDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
HCV E1 ectodomain, SYNZIP1 scaffold fusion A 206 Hepacivirus C , Homo Sapiens , Synthetic Construct YEVRNASGLYHVTNDCSNASIVYETTDMIMHTPGCVPCVREDNSSRCWVALTPTLAARNASVPTVAIRRHVDLLVGAAAFCSAMYVGDLCGSVFLVSQLFTFSPRRHETVQDCNCSIYPGHVSGHRMAWDMMMNWSPTAALVVSQLLRIPQAVVDMVAPGGRNAYLRKKIARLKKDNLQLERDEQNLEKIIANLRDEIARLENEVA
AR4A light chain B 236 Hepacivirus C , Homo Sapiens , Synthetic Construct MGVPTQVLGLLLLWLTDARCEIELTLTQSPGTLSLSPGERATLSCRASQSVSNNYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTGFTLIISRLEPEDFAVYYCQQYGSSSITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
AR4A heavy chain C 298 Hepacivirus C , Homo Sapiens , Synthetic Construct MYRMQLLSCIALSLALVTNSEVQLLEQSGPEVKKPGDSLRISCKMSGDSLVTTWIGWVRQKPGQGLEWMGIINPGDSSTNIYPGDSATRYGPSFQGQVTISIDKSTSTAYLQWNNVKASDTGIYYCARHVPVPISGTFLWREREMHDFGYFDDWGQGTLVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCAGWSHPQFEKGGGSGGGSGGSSAWSHPQFEK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-01-10
Deposition Author(s): Metcalf, M.C. , Ofek, G.