8FN2
The structure of a 50s ribosomal subunit in the lyme disease pathogen borreliella burgdorferi
PDB DOI: 10.2210/pdb8fn2/pdb
Classification: RIBOSOME Organism(s): Borreliella Burgdorferi B31
Deposited: 2022-12-26 Deposition Author(s): Agrawal, E.K. , Agrawal, R.K. , Banavali, N.K. , Keshavan, P. , Koripella, R.K. , Lin, Y.P. , Majumdar, S. , Manjari, S.R. , Marcinkiewicz, A.L. , Sharma, M.R.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.4 Å
The structure of a 50s ribosomal subunit in the lyme disease pathogen borreliella burgdorferi
Agrawal, E.K. , Agrawal, R.K. , Banavali, N.K. , Keshavan, P. , Koripella, R.K. , Lin, Y.P. , Majumdar, S. , Manjari, S.R. , Marcinkiewicz, A.L. , Sharma, M.R.
Primary Citation of Related Structures: 8FN2
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 50S ribosomal protein L29 | A | 65 | Borreliella Burgdorferi B31 | MKNFKNFTLEDMKAKRLELKKEYLDLRFKSVVGHVENPLKKREIRRDIARLNTMICEYELGIRKV |
| 50S ribosomal protein L11 | K | 139 | Borreliella Burgdorferi B31 | KAISWIKLQVPAAQAAPGAKIGQALGPHGVSGPQFVKEFNERTAKMDPGIVVPVIITVYSDKSFSFIVKTPPASILIKKAIGIESGSKKSNTDKVGTISKEKLMEIARIKMSDLNAKSESAAFKIIAGSARSMGVEVEK |
| 50S ribosomal protein L13 | L | 145 | Borreliella Burgdorferi B31 | NKITNNDTIWIKPKTVEKKWYVIDAADRILGKVAVDVVKILRGKHKAYYTPHQDLGDNVIIINASKVKLTGKKYQQKLYYRHSRYPGGLYSDTFRTLSERKPCAPLEIAIKGMLPKGPLGRNLFRNLKVFSGSEHTLKAQNPIKL |
| 50S ribosomal protein L14 | M | 122 | Borreliella Burgdorferi B31 | MIQMQTYLTIADNTGGKVAQCIKVLGGSKRRYAKIGDIITIVVKQAIPNSSVKKGDVYKAVIVRTSKEVRRKNGTYVRFDDNACVILDANLSPRGKRVFGPVARELRDANFMKVVSLASEVI |
| 50S ribosomal protein L15 | N | 145 | Borreliella Burgdorferi B31 | MFNLLKPKGASKRRKIVGRGPGSGLGKTSGRGQKGQKARNTSPRLGFEGGQTPLYRRLPRKGFSNSDYKLEYAIVNLGDIDKKFKDGQVVNYDTLLENKLIKKKNKKIKILSNGKLTKKVSFEVSKISKSAESLVIKIGCTIQLV |
| 50S ribosomal protein L16 | O | 138 | Borreliella Burgdorferi B31 | MLSPKKVKYRKKQRGRLSGEAQKGNKISFGEYGLVSLETNFITARQIEAARIAMTRKIKRGGRVWIRIFPDIPYTKKPAETRMGKGKGGVDHWNAPVKLGTVMFEMSGVVEELAQEAMSLASSKLPVKTMFVVRRDLR |
| 50S ribosomal protein L17 | P | 121 | Borreliella Burgdorferi B31 | MKTKLGFNRLSRKSSHRRALLKNMVISFFKHEKISSTKTKLFEVKRFAERLITRAKVDTVHNRRELSKFIHDKHILNKLFTKISPVFRQRSGGYTRMIKLGKRYGDAAEMAILELVEKPLK |
| 50S ribosomal protein L18 | Q | 119 | Borreliella Burgdorferi B31 | MKKIKEAEQRKLRRKKRIKDKIGRGVASRPRITVFKSNRYFYAQVIDDSKGHTIASISTIEKSLNLGKNIDDVKKLGEVLAKRLKEKNINNLIFDRNGYKYHGLIASFATSLREFGINI |
| 50S ribosomal protein L19 | R | 117 | Borreliella Burgdorferi B31 | MDLIRKIEAQNKKNEAFVFNVGDTVRVVYKIIEGSNERLQSFEGIVISFQNKGIGKTFLIRKISSGIGVEKIFPVYSPIIEKVEVLRRGKVRRAKLYYMRNRIGKAAMKIKERLTIK |
| 50S ribosomal protein L20 | S | 114 | Borreliella Burgdorferi B31 | ARAKNGTVHVARRKRILKKTKGFWGTKKSNYKKAKDTLRKGMMYATRDRKVRKRDFRRLWISRISAALSDTGVTYSRFIEGLLKSNIKINRKILSNLAIEDVEAFKKIVLEIRR |
| 50S ribosomal protein L21 | T | 103 | Borreliella Burgdorferi B31 | MYALVEINGKQYKAIEGEFLKIDKISPVEKDKLEFNSVLLINKDGEVKIGKPYVVNSLIRCTYKEDKKDKKVVSYRYRRRKSSERKVGHRQTYSYILVDEIVF |
| 50S ribosomal protein uL30 | B | 100 | Borreliella Burgdorferi B31 | IKRKLRLQLKKARFNASRSRSKNKCFIKRMENNRKIISKNNINVQVFLVRSLIGKLNKKVKVLKALGLNKIGDKKVHFLNESIKGMLNETINMILLSEVM |
| 50S ribosomal protein L22 | U | 115 | Borreliella Burgdorferi B31 | LVNRRYTAKGKNLPSSPKKVRPIADNIRGESYIKAIAVLCSMPNKGAKLLEKVVKSAASNAMYHNKNLSEDMIFVKTVMVDDGRRRKKIWPRARGRADRLVNRNCHIFVEVDEKK |
| 50S ribosomal protein L23 | V | 98 | Borreliella Burgdorferi B31 | MKAYDIIVSPMLTEKTNTQRESINVYVFKVNKRANKKEVGAAIKELFNVTPVSCNLLNIKSKAKVVVSRKGYPIGKGKTSSWKKAYVYLKKEDKIDIF |
| 50S ribosomal protein L24 | W | 101 | Borreliella Burgdorferi B31 | MKTKLKIGDSVKILSGKDRGRIGKIASINRKKNKVIVESCNMVKKVIKARTPQEKGRIIDKEAAIDISNVMIFVKGTSSRLGIRFENNEKIRYLKKNGQRI |
| 50S ribosomal protein L25 | X | 181 | Borreliella Burgdorferi B31 | ENSRVLSCQYRSSFGSSNARRIRAKSEIPAVVYGQGKDVSHLRIKSSEFNKKFAKFTDNTVLILDDGKLERCVFVKDAAENIASKLIYHIDFYEVDRNVELEKYVPIKLIGASIGVKEGGILTVLKEQVKVRSLPLDLPEFIELDLTPVNKGDSVLLKDLVLPSNVRLAENDENLEVVIIK |
| 50S ribosomal protein L27 | Y | 74 | Borreliella Burgdorferi B31 | GSSKNGRDSISKRLGVKRSGGQFVKAGEIIVRQRGTKFHKGKNVGLGRDYTIFALSSGKVEFKTLKGRKYVSIV |
| 50S ribosomal protein L28 | Z | 91 | Borreliella Burgdorferi B31 | ARKCEITGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPNLGRSVSIKVSANALRSISKIGLDAFLKKNCKKIENFL |
| 50S ribosomal protein L31 type B | C | 81 | Borreliella Burgdorferi B31 | MRKDIHPKNNLVVFKDGSNGAMFLTKSTLNSKETIKYIDGKEYPLVTVEITSKSHPFYTGQQKFVDAAGRIDKFNKRYKKS |
| 50S ribosomal protein L2 | D | 277 | Borreliella Burgdorferi B31 | MGIKTYKPKTSSLRYKTTLSFDDLSKGNDPLKSLTKGKKFKSGRDSSGRISIRRRGGGHKRKYRLIDFNRRDKFSIPARVASIEYDPNRSANIALLVYKDGEKRYIISPKGIKVGDVLESGPNAPIKIGNALPLENIPIGRTVHNIELNVGKGGQLIRSAGGYAMILASDGNYVTVKLSSGEMRLIFKKCIATIGEIGNEDYANISIGKAGKSRWLGRRPKVRGVAMNPVDHPHGGGEGKTSGGRHPVSPWGQPTKGYKTRKKKRYSDKFIIKRRNK |
| 50S ribosomal protein L3 | E | 206 | Borreliella Burgdorferi B31 | MLGLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSKPIKGQYKSLKDIEPKRYVIELKGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQGAMKRHNFSGGPSSHGSKFHRHLGGTGQATTPARTFKGTKMAGRMAGNQQTIQNLEVVLIDEEKRALLVKGAVPGAKGSFVVVKKSKK |
| 50S ribosomal protein L4 | F | 209 | Borreliella Burgdorferi B31 | MERKVFSKDGKEIGTINLDDRVFNIEISHGSIYNAIKNELSNLRVGTSSTKTRSEVRGSSKKPWKQKGTGRARVGTKRNPVWIGGGIALGPKPRDYSYRLPKKVKKLAFKSVLSLRAADENSFKVIENFNVESGKTKDLALIIKNFASFNGKVVILLGNDDQMIKRAGKNIRDLKILSFDKLRVVDLFYAKNLIALESAVNKLNEFYIK |
| 50S ribosomal protein L5 | G | 182 | Borreliella Burgdorferi B31 | MNYVPELKKYYKDSVIKELVKEFEYKSIMQVPKLEKIVISVGVGEAVRNKKLLDSAVLELAQITGQKAVKTKAKKAIAGFKIRQGQEIGAKVTLRGNAMYEFLYKLIHLALPRVKDFRGINGDAFDGNGNYSFGITEQIIFSEIDYDKIERISGLNITIVTTASNDKESKALLLKFGMPFSN |
| 50S ribosomal protein L6 | H | 180 | Borreliella Burgdorferi B31 | MSRIGRLPIKIPDAVKVDVKDNLVIVEGIRGRLVQDIKDSINVKVENGSVIVDRVLNDKKAKAYHGLYRSLIFNMVKGVTEGFSKSLTINGIGYRVEQQGNSLFLSLGYSTQFEYVIPDGISVKLDGNTKISVEGIDKFKVGQVAAEIRSLKKPEPYKGKGIKYDNEVIRRKVGKSGVKK |
| 50S ribosomal protein L9 | I | 148 | Borreliella Burgdorferi B31 | MKVILKEDFINLGKEGDTVEVRDGFARNYLLPKGFAVFSNKHNIEIFNQKRRSILKKQEAKKQMANDLKSKLDLVKLEFFMKSNDSGKLFHSINSLNIADELLKLGFDIERKKIDIHHGTLKTFGTYDVTIKLYEGISSIIKVEIKKE |
| 50S ribosomal protein L10 | J | 162 | Borreliella Burgdorferi B31 | MSAKINAKKLEMFDLLKQFIDSKQNLFFLDYRGLNVAQLTELRNKIEGEHGSLKVVKNNIMKMVLKEKNINVVDSCLVGPTVVVTALEEANVIAKIFYDFVKSSTLKVKGGFVLGEFYDEAKVQAYSKLPTKKESISLFASVLKAPVSKLARTLKALADVKN |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-12-26 Deposition Author(s): Agrawal, E.K. , Agrawal, R.K. , Banavali, N.K. , Keshavan, P. , Koripella, R.K. , Lin, Y.P. , Majumdar, S. , Manjari, S.R. , Marcinkiewicz, A.L. , Sharma, M.R.