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8FIL

Zinc-free apobec3a (inactive e72a mutant) in complex with ttc-hairpin dna substrate

PDB DOI: 10.2210/pdb8fil/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2022-12-16
Deposition Author(s): Filichev, V.V. , Harjes, E. , Harjes, S. , Jameson, G.B. , Kurup, H.M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.01 Å

Literature

Zinc-free apobec3a (inactive e72a mutant) in complex with ttc-hairpin dna substrate

Filichev, V.V. , Harjes, E. , Harjes, S. , Jameson, G.B. , Kurup, H.M.

Primary Citation of Related Structures: 8FIL


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA dC->dU-editing enzyme APOBEC-3A A 199 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MEASPASGPRHLMDPHIFTSNFNNGIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLLCGFYGRHAALRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLDEHSQALSGRLRAILQNQGN
DNA dC->dU-editing enzyme APOBEC-3A B 199 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MEASPASGPRHLMDPHIFTSNFNNGIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLLCGFYGRHAALRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLDEHSQALSGRLRAILQNQGN

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*TP*GP*CP*GP*CP*TP*TP*CP*GP*CP*GP*CP*T)-3') d 13 NA TGCGCTTCGCGCT
DNA (5'-D(*TP*GP*CP*GP*CP*TP*TP*CP*GP*CP*GP*CP*T)-3') e 13 NA TGCGCTTCGCGCT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-12-16
Deposition Author(s): Filichev, V.V. , Harjes, E. , Harjes, S. , Jameson, G.B. , Kurup, H.M.