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FASTA Sequence PDB Format mmCIF Format
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8FF4

Cryo-em structure of cascade-dna-tniq-tnsc complex (composite) in type i-b cast system

PDB DOI: 10.2210/pdb8ff4/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct

Deposited: 2022-12-07
Deposition Author(s): Chang, L. , Wang, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

8ff4
Literature

Cryo-em structure of cascade-dna-tniq-tnsc complex (composite) in type i-b cast system

Chang, L. , Wang, S.

Primary Citation of Related Structures: 8FF4


Proteins
Molecule Chains Sequence Length Organism Sequence
Type I-B CRISPR-associated protein Cas5 A 212 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MIAPLILYLDVPFTTFRESHAREMGKTYPVPPPATVYGMLLSLVGETNVYRHCGVELAIAMLSSPKKSRILRQMRRFKNADFSHPENVIPCYQEILSNLKCLIWVRSDEEKIQPSLRERIQLAFDHPELVRRFGCLFLGESDQLIKTIKLAREDYLEGVRQWAIRDNRGRLTLPYWVDHVGSRNTRFLRYRIEEMDRLSPPDLAWTMVQSPI
TnsC Q 383 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MTKSTGFPLELLTRPATERLAYFENYTVAHPRLKEVYEILMRTIAEPAGASFIFVYGASGVGKTTLRLRVEQKLTELALPKLESDRARVPVVGIEAIAPESRYFNWKEYYTRALITLEEPLIDHKFDYGVRGISRDNFGKINVESKVVAPALRRALENALIHRHPDVFFVDEAQHFGKVASGYKLQDQLDCLKSLANMTGILHCLLGTYELLTFRNLSGQLSRRSVDIHFRRYCADSPEDVQAFKSVLLTFQQHLPLAETPNLVDHWEYFYERTLGCIGTLKDWLKRVLSDALDREATTITLKDLQKRALSVAQCQKMFKEIQEGERQLSETEADVQNLRSALGLGAKPIVLPEETPKTTRPPGKVGKRKPKRDPIGVQQDVS
TnsC R 383 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MTKSTGFPLELLTRPATERLAYFENYTVAHPRLKEVYEILMRTIAEPAGASFIFVYGASGVGKTTLRLRVEQKLTELALPKLESDRARVPVVGIEAIAPESRYFNWKEYYTRALITLEEPLIDHKFDYGVRGISRDNFGKINVESKVVAPALRRALENALIHRHPDVFFVDEAQHFGKVASGYKLQDQLDCLKSLANMTGILHCLLGTYELLTFRNLSGQLSRRSVDIHFRRYCADSPEDVQAFKSVLLTFQQHLPLAETPNLVDHWEYFYERTLGCIGTLKDWLKRVLSDALDREATTITLKDLQKRALSVAQCQKMFKEIQEGERQLSETEADVQNLRSALGLGAKPIVLPEETPKTTRPPGKVGKRKPKRDPIGVQQDVS
TnsC S 383 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MTKSTGFPLELLTRPATERLAYFENYTVAHPRLKEVYEILMRTIAEPAGASFIFVYGASGVGKTTLRLRVEQKLTELALPKLESDRARVPVVGIEAIAPESRYFNWKEYYTRALITLEEPLIDHKFDYGVRGISRDNFGKINVESKVVAPALRRALENALIHRHPDVFFVDEAQHFGKVASGYKLQDQLDCLKSLANMTGILHCLLGTYELLTFRNLSGQLSRRSVDIHFRRYCADSPEDVQAFKSVLLTFQQHLPLAETPNLVDHWEYFYERTLGCIGTLKDWLKRVLSDALDREATTITLKDLQKRALSVAQCQKMFKEIQEGERQLSETEADVQNLRSALGLGAKPIVLPEETPKTTRPPGKVGKRKPKRDPIGVQQDVS
TnsC T 383 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MTKSTGFPLELLTRPATERLAYFENYTVAHPRLKEVYEILMRTIAEPAGASFIFVYGASGVGKTTLRLRVEQKLTELALPKLESDRARVPVVGIEAIAPESRYFNWKEYYTRALITLEEPLIDHKFDYGVRGISRDNFGKINVESKVVAPALRRALENALIHRHPDVFFVDEAQHFGKVASGYKLQDQLDCLKSLANMTGILHCLLGTYELLTFRNLSGQLSRRSVDIHFRRYCADSPEDVQAFKSVLLTFQQHLPLAETPNLVDHWEYFYERTLGCIGTLKDWLKRVLSDALDREATTITLKDLQKRALSVAQCQKMFKEIQEGERQLSETEADVQNLRSALGLGAKPIVLPEETPKTTRPPGKVGKRKPKRDPIGVQQDVS
TnsC U 383 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MTKSTGFPLELLTRPATERLAYFENYTVAHPRLKEVYEILMRTIAEPAGASFIFVYGASGVGKTTLRLRVEQKLTELALPKLESDRARVPVVGIEAIAPESRYFNWKEYYTRALITLEEPLIDHKFDYGVRGISRDNFGKINVESKVVAPALRRALENALIHRHPDVFFVDEAQHFGKVASGYKLQDQLDCLKSLANMTGILHCLLGTYELLTFRNLSGQLSRRSVDIHFRRYCADSPEDVQAFKSVLLTFQQHLPLAETPNLVDHWEYFYERTLGCIGTLKDWLKRVLSDALDREATTITLKDLQKRALSVAQCQKMFKEIQEGERQLSETEADVQNLRSALGLGAKPIVLPEETPKTTRPPGKVGKRKPKRDPIGVQQDVS
TnsC V 383 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MTKSTGFPLELLTRPATERLAYFENYTVAHPRLKEVYEILMRTIAEPAGASFIFVYGASGVGKTTLRLRVEQKLTELALPKLESDRARVPVVGIEAIAPESRYFNWKEYYTRALITLEEPLIDHKFDYGVRGISRDNFGKINVESKVVAPALRRALENALIHRHPDVFFVDEAQHFGKVASGYKLQDQLDCLKSLANMTGILHCLLGTYELLTFRNLSGQLSRRSVDIHFRRYCADSPEDVQAFKSVLLTFQQHLPLAETPNLVDHWEYFYERTLGCIGTLKDWLKRVLSDALDREATTITLKDLQKRALSVAQCQKMFKEIQEGERQLSETEADVQNLRSALGLGAKPIVLPEETPKTTRPPGKVGKRKPKRDPIGVQQDVS
TnsC W 383 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MTKSTGFPLELLTRPATERLAYFENYTVAHPRLKEVYEILMRTIAEPAGASFIFVYGASGVGKTTLRLRVEQKLTELALPKLESDRARVPVVGIEAIAPESRYFNWKEYYTRALITLEEPLIDHKFDYGVRGISRDNFGKINVESKVVAPALRRALENALIHRHPDVFFVDEAQHFGKVASGYKLQDQLDCLKSLANMTGILHCLLGTYELLTFRNLSGQLSRRSVDIHFRRYCADSPEDVQAFKSVLLTFQQHLPLAETPNLVDHWEYFYERTLGCIGTLKDWLKRVLSDALDREATTITLKDLQKRALSVAQCQKMFKEIQEGERQLSETEADVQNLRSALGLGAKPIVLPEETPKTTRPPGKVGKRKPKRDPIGVQQDVS
Type I-B CRISPR-associated protein Cas6 B 220 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MTAILIQSEEYVDLTFKLRGAPIPLDNGYLTYAALSRICPPLHELKSIGIHPIAGIPTRNNLLELTAQSRLKIRIYHQQIPLIYPYLAGQAFHIGQNFYQLDIPDYKPLISSESVYSRLVIIKGFQDSTNFIEAVQRQMDNLGIQGKIELLTRQDGTPQRRQLTINKEGKQFKVRGFGVKISELNPEDSLTLQEQGIGGKRKMMCGIFVPATRSKEEEET
Type I-B CRISPR-associated protein Cas7 C 323 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MMTQKKNDSNIPNYYLYGTVLTRYGLASLNHDIRRGNKTILQKGYWNNGKIHSFVGSSAIRWALRFYLQKQGYLVNRVWDEEEHINRLTSEDFDPEKFYDDDIFGFALLESAETEEDTSTTKRKKKQTKTSTPNQRMGALGMNMAVSLTPYDGAVKLGAKSGREKDSTSLHFTEYHATRYQYYFGIDATHLKDFSRILPMIDGIMNLPKVGGSSNIFNYPFCPDSLVFQWTNHFASYISYCFEYCDPKSKEAKLSQEFIDEVECGQIDPSKLWIGGTIVKDLQQLDNFESSPLNKAHIYRNRNEMIEALKTVIKRDLGLEESK
Type I-B CRISPR-associated protein Cas7 D 323 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MMTQKKNDSNIPNYYLYGTVLTRYGLASLNHDIRRGNKTILQKGYWNNGKIHSFVGSSAIRWALRFYLQKQGYLVNRVWDEEEHINRLTSEDFDPEKFYDDDIFGFALLESAETEEDTSTTKRKKKQTKTSTPNQRMGALGMNMAVSLTPYDGAVKLGAKSGREKDSTSLHFTEYHATRYQYYFGIDATHLKDFSRILPMIDGIMNLPKVGGSSNIFNYPFCPDSLVFQWTNHFASYISYCFEYCDPKSKEAKLSQEFIDEVECGQIDPSKLWIGGTIVKDLQQLDNFESSPLNKAHIYRNRNEMIEALKTVIKRDLGLEESK
Type I-B CRISPR-associated protein Cas7 E 323 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MMTQKKNDSNIPNYYLYGTVLTRYGLASLNHDIRRGNKTILQKGYWNNGKIHSFVGSSAIRWALRFYLQKQGYLVNRVWDEEEHINRLTSEDFDPEKFYDDDIFGFALLESAETEEDTSTTKRKKKQTKTSTPNQRMGALGMNMAVSLTPYDGAVKLGAKSGREKDSTSLHFTEYHATRYQYYFGIDATHLKDFSRILPMIDGIMNLPKVGGSSNIFNYPFCPDSLVFQWTNHFASYISYCFEYCDPKSKEAKLSQEFIDEVECGQIDPSKLWIGGTIVKDLQQLDNFESSPLNKAHIYRNRNEMIEALKTVIKRDLGLEESK
Type I-B CRISPR-associated protein Cas7 F 323 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MMTQKKNDSNIPNYYLYGTVLTRYGLASLNHDIRRGNKTILQKGYWNNGKIHSFVGSSAIRWALRFYLQKQGYLVNRVWDEEEHINRLTSEDFDPEKFYDDDIFGFALLESAETEEDTSTTKRKKKQTKTSTPNQRMGALGMNMAVSLTPYDGAVKLGAKSGREKDSTSLHFTEYHATRYQYYFGIDATHLKDFSRILPMIDGIMNLPKVGGSSNIFNYPFCPDSLVFQWTNHFASYISYCFEYCDPKSKEAKLSQEFIDEVECGQIDPSKLWIGGTIVKDLQQLDNFESSPLNKAHIYRNRNEMIEALKTVIKRDLGLEESK
Type I-B CRISPR-associated protein Cas7 G 323 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MMTQKKNDSNIPNYYLYGTVLTRYGLASLNHDIRRGNKTILQKGYWNNGKIHSFVGSSAIRWALRFYLQKQGYLVNRVWDEEEHINRLTSEDFDPEKFYDDDIFGFALLESAETEEDTSTTKRKKKQTKTSTPNQRMGALGMNMAVSLTPYDGAVKLGAKSGREKDSTSLHFTEYHATRYQYYFGIDATHLKDFSRILPMIDGIMNLPKVGGSSNIFNYPFCPDSLVFQWTNHFASYISYCFEYCDPKSKEAKLSQEFIDEVECGQIDPSKLWIGGTIVKDLQQLDNFESSPLNKAHIYRNRNEMIEALKTVIKRDLGLEESK
Type I-B CRISPR-associated protein Cas7 H 323 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MMTQKKNDSNIPNYYLYGTVLTRYGLASLNHDIRRGNKTILQKGYWNNGKIHSFVGSSAIRWALRFYLQKQGYLVNRVWDEEEHINRLTSEDFDPEKFYDDDIFGFALLESAETEEDTSTTKRKKKQTKTSTPNQRMGALGMNMAVSLTPYDGAVKLGAKSGREKDSTSLHFTEYHATRYQYYFGIDATHLKDFSRILPMIDGIMNLPKVGGSSNIFNYPFCPDSLVFQWTNHFASYISYCFEYCDPKSKEAKLSQEFIDEVECGQIDPSKLWIGGTIVKDLQQLDNFESSPLNKAHIYRNRNEMIEALKTVIKRDLGLEESK
Type I-B CRISPR-associated protein Cas8 I 534 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MHHHHHHHHIVSTQPKISLSLHAADTTIMHRVGMTGLYMTLKRLEKQYPLSRQRGGHISWFLTADTIELFWEGSDFIALSWLINESFQLDDTGLIHLVGLDNDRIDLRQKIHIHEGICGVFLRLNKFYQAGEIINTELRFEEKQVEYQYKSLTWYAHQTFAEKLCEADTQQLRHDYIQITSWLYLGGIVRHARTQNTTKLEEKPEYALALLFVPVVCHYCLLHIPSEDLKERKPHRYLVVIPEIKDFEDASQRRWRLQQLETKQFHVSSLGEAGLLYYSLDDIQPEVAYYQACQVWLYEKTNKASRQRTLMSIEEIKIDKNILITYQQVQKYFKTNYQIIKYKQIFIKVNPIRSLIADNLVKGIHWWSNFWEKLVIEDSKEYLFNQLFSNREGFIIMAENSEEDKQYLIFIKVFQQAMKGNFAKIYAKTEEGKDPPIKKKVERLRAELNYCYDELSFKEYLSDFLVRGGLNKYFNEHQEEIALLIKKSPWQEIRIWSLLAIASYKPKDKLTNRDDSSLSNNQKLEEVNDDSEEE
Type I-B CRISPR-associated protein Cas11 J 138 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MAENSEEDKQYLIFIKVFQQAMKGNFAKIYAKTEEGKDPPIKKKVERLRAELNYCYDELSFKEYLSDFLVRGGLNKYFNEHQEEIALLIKKSPWQEIRIWSLLAIASYKPKDKLTNRDDSSLSNNQKLEEVNDDSEEE
Type I-B CRISPR-associated protein Cas11 K 138 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MAENSEEDKQYLIFIKVFQQAMKGNFAKIYAKTEEGKDPPIKKKVERLRAELNYCYDELSFKEYLSDFLVRGGLNKYFNEHQEEIALLIKKSPWQEIRIWSLLAIASYKPKDKLTNRDDSSLSNNQKLEEVNDDSEEE
Type I-B CRISPR-associated protein Cas11 L 138 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MAENSEEDKQYLIFIKVFQQAMKGNFAKIYAKTEEGKDPPIKKKVERLRAELNYCYDELSFKEYLSDFLVRGGLNKYFNEHQEEIALLIKKSPWQEIRIWSLLAIASYKPKDKLTNRDDSSLSNNQKLEEVNDDSEEE
TniQ P 329 Nostoc Sp. 'Peltigera Membranacea Cyanobiont' 210A , Synthetic Construct MTIYSEHWSLNPLEIPQRSRLFSLEPVAVGTPYAESLSSYLHRLAQAHCLTSEKLVMGEIAPLILKDEDKSELLSKNLSHLLGNSDAKPAINGMREMTEKLVTVLEELTMRQDLRFLTLLSWKGMIYDKGLFRNYRAWCPCCCEEWMQKNKTIYEPLSWSFKDVEFCLIHKQRLIEECSHCGARLPVMARLSPAGFCSRCYGWLGQEIKGEEEIEKYRVNIQGISELIALTPQLGYKPIPIELTRKLQLILLVFEQAIGKDVKLLGDLGGIMESLRIASTTNQSQPYHLVKLIIPVCEKAKISVFQLFGSDFKELGKILFGNFSLELKL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA m 71 NA UUGCUCAAGAGAAGUCAUUUAAUAAGGCCACUGUUAAACGUAGGUGAGUCGUGGCUUUAUGCCGUUAGGCG
Target DNA strand n 85 NA GGCCGCTACGTATCGTAGATATATCTACGCGTAGATATATCTACGTTTAACAGTGGCCTTATTAAATGACTTCTCCATGATCTAC
Non-target DNA strand o 85 NA GTAGATCATGGAGAAGTCATTTAATAAGGCCACTGTTAAACGTAGATATATCTACGCGTAGATATATCTACGATACGTAGCGGCC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-12-07
Deposition Author(s): Chang, L. , Wang, S.