8FAK
Dna replication fork binding triggers structural changes in the pria dna helicase that regulate the pria-prib replication restart pathway in e. coli
PDB DOI: 10.2210/pdb8fak/pdb
Classification: HELICASE/DNA Organism(s): Escherichia Coli (Strain K12) , Synthetic Construct
Deposited: 2022-11-28 Deposition Author(s): Blumenthal, K.H. , Deorio, H.R. , Duckworth, A.T. , Ducos, P.L. , Grant, T. , Keck, J.L. , Larson, J.A. , Mcmillan, S.D. , Sandler, S.J. , Satyshur, K.A.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.22 Å
Dna replication fork binding triggers structural changes in the pria dna helicase that regulate the pria-prib replication restart pathway in e. coli
Blumenthal, K.H. , Deorio, H.R. , Duckworth, A.T. , Ducos, P.L. , Grant, T. , Keck, J.L. , Larson, J.A. , Mcmillan, S.D. , Sandler, S.J. , Satyshur, K.A.
Primary Citation of Related Structures: 8FAK
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Primosomal replication protein N | A | 104 | Escherichia Coli (Strain K12) , Synthetic Construct | MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDSGD |
| Primosomal replication protein N | B | 104 | Escherichia Coli (Strain K12) , Synthetic Construct | MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDSGD |
| Primosomal protein N' | H | 732 | Escherichia Coli (Strain K12) , Synthetic Construct | MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIEG |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(P*CP*AP*GP*AP*CP*TP*CP*AP*TP*TP*TP*AP*GP*CP*CP*CP*TP*TP*AP*TP*CP*CP*G)-3') | g | 40 | NA | GCCGCAGACTCATTTAGCCCTTATCCGTATTGCGGTCTCG |
| DNA (5'-D(P*CP*GP*GP*AP*TP*AP*AP*GP*GP*GP*CP*TP*GP*AP*GP*CP*AP*CP*GP*CP*CP*GP*A)-3') | j | 40 | NA | CGAGACCGCAATACGGATAAGGGCTGAGCACGCCGACGAA |
| DNA (5'-D(P*TP*CP*GP*GP*CP*GP*TP*GP*CP*TP*C)-3') | z | 15 | NA | TTCGTCGGCGTGCTC |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-11-28 Deposition Author(s): Blumenthal, K.H. , Deorio, H.R. , Duckworth, A.T. , Ducos, P.L. , Grant, T. , Keck, J.L. , Larson, J.A. , Mcmillan, S.D. , Sandler, S.J. , Satyshur, K.A.