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FASTA Sequence PDB Format mmCIF Format
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8F0H

Structure of sars-cov-2 spike with antibody fabs 2a10 and 1h2 (local refinement of the rbd and fabs 1h2 and 2a10)

PDB DOI: 10.2210/pdb8f0h/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2022-11-02
Deposition Author(s): Hastie, K.M. , Saphire, E.O. , Yu, X. , Zyla, D.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.18 Å

8f0h
Literature

Structure of sars-cov-2 spike with antibody fabs 2a10 and 1h2 (local refinement of the rbd and fabs 1h2 and 2a10)

Hastie, K.M. , Saphire, E.O. , Yu, X. , Zyla, D.

Primary Citation of Related Structures: 8F0H


Proteins
Molecule Chains Sequence Length Organism Sequence
Antibody Fab 1H2 heavy chain B 124 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLQQSGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMRSLRAEDTALYYCAKDSGRKLLWGREDYYMGVWGKGTTVTV
Spike glycoprotein C 1212 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 MGVKVLFALICIAVAEAQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPGSASSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQ
Antibody Fab 1H2 light chain D 101 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 SYELTQPPSVSVAPGKTARITCGGSNIGSKSVHWYQQKPGQAPVLVIYYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVVFGG
Antibody Fab 2A10 heavy chain H 115 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLVESGGGLIQPGGSLRLSCAASEFIVSSNYMSWVRQAPGKGLEWVSLLYSGGTTYYADSVKGRFTISRDNSKNTLFLQMNSLRAEDTAMYYCARDRGPWLHDYWGQGTLVTV
Antibody Fab 2A10 light chain L 109 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 DIVMTQSPSSLSASVGDRVTITCQASQDINKYCNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTINSLQPEDIATYYCQQYDNLPPTFGGGTKVEIKRT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-11-02
Deposition Author(s): Hastie, K.M. , Saphire, E.O. , Yu, X. , Zyla, D.