8EX9
Isdra2 tnpb in complex with rerna and cognate dna, conformation 2 (ruvc domain unresolved)
PDB DOI: 10.2210/pdb8ex9/pdb
Classification: RNA BINDING PROTEIN Organism(s): Deinococcus Radiodurans R1 , Synthetic Construct
Deposited: 2022-10-25 Deposition Author(s): Carabias, A. , Druteika, G. , Karvelis, T. , Kazlauskas, D. , Montoya, G. , Sasnauskas, G. , Siksnys, V. , Silanskas, A. , Tamulaitiene, G. , Venclovas, C.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.96 Å
Isdra2 tnpb in complex with rerna and cognate dna, conformation 2 (ruvc domain unresolved)
Carabias, A. , Druteika, G. , Karvelis, T. , Kazlauskas, D. , Montoya, G. , Sasnauskas, G. , Siksnys, V. , Silanskas, A. , Tamulaitiene, G. , Venclovas, C.
Primary Citation of Related Structures: 8EX9
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA-guided DNA endonuclease TnpB | A | 408 | Deinococcus Radiodurans R1 , Synthetic Construct | MIRNKAFVVRLYPNAAQTELINRTLGSARFVYNHFLARRIAAYKESGKGLTYGQTSSELTLLKQAEETSWLSEVDKFALQNSLKNLETAYKNFFRTVKQSGKKVGFPRFRKKRTGESYRTQFTNNNIQIGEGRLKLPKLGWVKTKGQQDIQGKILNVTVRRIHEGHYEASVLCEVEIPYLPAAPKFAAGVDVGIKDFAIVTDGVRFKHEQNPKYYRSTLKRLRKAQQTLSRRKKGSARYGKAKTKLARIHKRIVNKRQDFLHKLTTSLVREYEIIGTEHLKPDNMRKNRRLALSISDAGWGEFIRQLEYKAAWYGRLVSKVSPYFPSSQLCHDCGFKNPEVKNLAVRTWTCPNCGETHDRDENAALNIRREALVAAGISDTLNAHGGYVRPASAGNGLRSENHATLVV |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA (150-MER) | b | 150 | NA | CAUUCGGCGUGAAGCGUUGGUGGCUGCGGGAAUCUCAGACACCUUAAACGCUCAUGGAGGCUAUGUCAGACCUGCUUCGGCGGGCAAUGGUCUGCGAAGUGAGAAUCACGCGACUUUAGUCGUGUGAGGUUCAAGAGUCCCUUGGCGCCC |
| DNA (43-MER) | c | 43 | NA | GTCATGGGCGCCAAGGGACTCATCAAGCGACGGTTGATCTCAG |
| DNA (43-MER) | d | 43 | NA | GTCATGGGCGCCAAGGGACTCATCAACCGTCGCTTGATCTCAG |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-10-25 Deposition Author(s): Carabias, A. , Druteika, G. , Karvelis, T. , Kazlauskas, D. , Montoya, G. , Sasnauskas, G. , Siksnys, V. , Silanskas, A. , Tamulaitiene, G. , Venclovas, C.