8EQI
Crystal structure of danio rerio histone deacetylase 6 catalytic domain 2 complexed with cyclopeptide des4.2.0
PDB DOI: 10.2210/pdb8eqi/pdb
Classification: HYDROLASE/INHIBITOR Organism(s): Danio Rerio , Synthetic Construct
Deposited: 2022-10-07 Deposition Author(s): Christianson, D.W. , Watson, P.R.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2 Å
Crystal structure of danio rerio histone deacetylase 6 catalytic domain 2 complexed with cyclopeptide des4.2.0
Christianson, D.W. , Watson, P.R.
Primary Citation of Related Structures: 8EQI
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Hdac6 protein | A | 364 | Danio Rerio , Synthetic Construct | SNAGGSSPITGLVYDQRMMLHHNMWDSHHPELPQRISRIFSRHEELRLLSRCHRIPARLATEEELALCHSSKHISIIKSSEHMKPRDLNRLGDEYNSIFISNESYTCALLAAGSCFNSAQAILTGQVRNAVAIVRPPGHHAEKDTACGFCFFNTAALTARYAQSITRESLRVLIVDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWNGGKMGDPEYMAAFHHLVMPIAREFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLAAGRVLIILEGGYNLTSISESMSMCTSMLLGDSPPSLDHLTPLKTSATVSINNVLRAHAPFWSSLR |
| Hdac6 protein | B | 364 | Danio Rerio , Synthetic Construct | SNAGGSSPITGLVYDQRMMLHHNMWDSHHPELPQRISRIFSRHEELRLLSRCHRIPARLATEEELALCHSSKHISIIKSSEHMKPRDLNRLGDEYNSIFISNESYTCALLAAGSCFNSAQAILTGQVRNAVAIVRPPGHHAEKDTACGFCFFNTAALTARYAQSITRESLRVLIVDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWNGGKMGDPEYMAAFHHLVMPIAREFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLAAGRVLIILEGGYNLTSISESMSMCTSMLLGDSPPSLDHLTPLKTSATVSINNVLRAHAPFWSSLR |
| Cyclopeptide des4.2.0 | F | 8 | Danio Rerio , Synthetic Construct | XYESSDRV |
| Cyclopeptide des4.2.0 | G | 8 | Danio Rerio , Synthetic Construct | XYESSDRV |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2022-10-07 Deposition Author(s): Christianson, D.W. , Watson, P.R.