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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8EPX

Type iis restriction endonuclease paqci, dna bound

PDB DOI: 10.2210/pdb8epx/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Paucibacter Aquatile , Synthetic Construct

Deposited: 2022-10-06
Deposition Author(s): Kennedy, M.A. , Stoddard, B.L.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.15 Å

8epx
Literature

Type iis restriction endonuclease paqci, dna bound

Kennedy, M.A. , Stoddard, B.L.

Primary Citation of Related Structures: 8EPX


Proteins
Molecule Chains Sequence Length Organism Sequence
Type IIS Restriction Endonuclease PaqCI A 510 Paucibacter Aquatile , Synthetic Construct MPYDHNAEADFAASEVARMLVADPGLCYDAASLPASISASASYEPSAAGWPKADGLVSVLEGGTSTQRAIALEYKRPQEGIHGLLTAIGQAHGYLHKGYSGAAIVIPGRYSSHPTPAEYVRDVLNAISGSRAIAVFSYSPPDTTSPTPFAGRIQCVRPLVFDAGRVHLRPANQGPKTQWVHMREGSTTRDAFFRFLQVAKRLSADPTAPRPTLRSELVAAIGRLAPGRDPIEYITNTADNKFLTKVWQFFWLEWLATPAVLTPWKLEAGVYSAPGARTRILREDGTDFSQLWEGRVNSLKETIAGMLNRGEISEAQGWEAFVGGISATGGGQDKQGVRARAHSYREDIDSALAQLRWIEDDGLPTDQGYRFMTICERYGGANSRAAIDYMGATLIQTGRYASFLHYINRLSERKFAENPLAYTKPGPGGMPVFTEESYWEYLQDLETKLTDELRVMRKVSGRARPRVRTTFQVELTLLRNYGFVSSTRHRLGVGIPIDWEQVVQALNVDL
Type IIS Restriction Endonuclease PaqCI B 510 Paucibacter Aquatile , Synthetic Construct MPYDHNAEADFAASEVARMLVADPGLCYDAASLPASISASASYEPSAAGWPKADGLVSVLEGGTSTQRAIALEYKRPQEGIHGLLTAIGQAHGYLHKGYSGAAIVIPGRYSSHPTPAEYVRDVLNAISGSRAIAVFSYSPPDTTSPTPFAGRIQCVRPLVFDAGRVHLRPANQGPKTQWVHMREGSTTRDAFFRFLQVAKRLSADPTAPRPTLRSELVAAIGRLAPGRDPIEYITNTADNKFLTKVWQFFWLEWLATPAVLTPWKLEAGVYSAPGARTRILREDGTDFSQLWEGRVNSLKETIAGMLNRGEISEAQGWEAFVGGISATGGGQDKQGVRARAHSYREDIDSALAQLRWIEDDGLPTDQGYRFMTICERYGGANSRAAIDYMGATLIQTGRYASFLHYINRLSERKFAENPLAYTKPGPGGMPVFTEESYWEYLQDLETKLTDELRVMRKVSGRARPRVRTTFQVELTLLRNYGFVSSTRHRLGVGIPIDWEQVVQALNVDL
Type IIS Restriction Endonuclease PaqCI C 510 Paucibacter Aquatile , Synthetic Construct MPYDHNAEADFAASEVARMLVADPGLCYDAASLPASISASASYEPSAAGWPKADGLVSVLEGGTSTQRAIALEYKRPQEGIHGLLTAIGQAHGYLHKGYSGAAIVIPGRYSSHPTPAEYVRDVLNAISGSRAIAVFSYSPPDTTSPTPFAGRIQCVRPLVFDAGRVHLRPANQGPKTQWVHMREGSTTRDAFFRFLQVAKRLSADPTAPRPTLRSELVAAIGRLAPGRDPIEYITNTADNKFLTKVWQFFWLEWLATPAVLTPWKLEAGVYSAPGARTRILREDGTDFSQLWEGRVNSLKETIAGMLNRGEISEAQGWEAFVGGISATGGGQDKQGVRARAHSYREDIDSALAQLRWIEDDGLPTDQGYRFMTICERYGGANSRAAIDYMGATLIQTGRYASFLHYINRLSERKFAENPLAYTKPGPGGMPVFTEESYWEYLQDLETKLTDELRVMRKVSGRARPRVRTTFQVELTLLRNYGFVSSTRHRLGVGIPIDWEQVVQALNVDL
Type IIS Restriction Endonuclease PaqCI D 510 Paucibacter Aquatile , Synthetic Construct MPYDHNAEADFAASEVARMLVADPGLCYDAASLPASISASASYEPSAAGWPKADGLVSVLEGGTSTQRAIALEYKRPQEGIHGLLTAIGQAHGYLHKGYSGAAIVIPGRYSSHPTPAEYVRDVLNAISGSRAIAVFSYSPPDTTSPTPFAGRIQCVRPLVFDAGRVHLRPANQGPKTQWVHMREGSTTRDAFFRFLQVAKRLSADPTAPRPTLRSELVAAIGRLAPGRDPIEYITNTADNKFLTKVWQFFWLEWLATPAVLTPWKLEAGVYSAPGARTRILREDGTDFSQLWEGRVNSLKETIAGMLNRGEISEAQGWEAFVGGISATGGGQDKQGVRARAHSYREDIDSALAQLRWIEDDGLPTDQGYRFMTICERYGGANSRAAIDYMGATLIQTGRYASFLHYINRLSERKFAENPLAYTKPGPGGMPVFTEESYWEYLQDLETKLTDELRVMRKVSGRARPRVRTTFQVELTLLRNYGFVSSTRHRLGVGIPIDWEQVVQALNVDL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA 4a e 15 NA GGCGCAGGTGGGAAG
DNA 4b f 15 NA CTTCCCACCTGCGCC
DNA 2a h 16 NA TCTTCCCACCTGCGCC
DNA 2b g 16 NA GGCGCAGGTGGGAAGA
DNA 3a i 18 NA TGGCGCAGGTGGGAAGAA
DNA 3b j 18 NA TTCTTCCCACCTGCGCCA
DNA 1a k 23 NA CCTCGCGTGGCGCAGGTGGGAAG
DNA 1b l 23 NA CTTCCCACCTGCGCCACGCGAGG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-10-06
Deposition Author(s): Kennedy, M.A. , Stoddard, B.L.