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FASTA Sequence PDB Format mmCIF Format
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8EPQ

Cryo-em structure of sars-cov-2 spike trimer s2d14 with two rbds exposed

PDB DOI: 10.2210/pdb8epq/pdb

Classification: VIRAL PROTEIN
Organism(s): Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2022-10-06
Deposition Author(s): Harshbarger, W. , Williams, J.A.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.3 Å

8epq
Literature

Cryo-em structure of sars-cov-2 spike trimer s2d14 with two rbds exposed

Harshbarger, W. , Williams, J.A.

Primary Citation of Related Structures: 8EPQ


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike glycoprotein A 1121 Severe Acute Respiratory Syndrome Coronavirus 2 AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPGSASSVASQSIIAYTMSLGEENSVAYSNNSIAIPTNFTISVTTEIIPVSMQKVSVDCTMYICGDSEECSNLLLQYGSFCTQLNRALHEIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSAIEDLLFNKVTLADAGFIKGYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAAYTSALLAGTITAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNKAIGKIQDGLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLINGRLQALNTYVTQQLIRAAEIRASANLAAEKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPTQYKNFTTAPAICHNGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGDCDVVIGIVNNTVYDPLQPELDS
Spike glycoprotein B 1121 Severe Acute Respiratory Syndrome Coronavirus 2 AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPGSASSVASQSIIAYTMSLGEENSVAYSNNSIAIPTNFTISVTTEIIPVSMQKVSVDCTMYICGDSEECSNLLLQYGSFCTQLNRALHEIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSAIEDLLFNKVTLADAGFIKGYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAAYTSALLAGTITAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNKAIGKIQDGLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLINGRLQALNTYVTQQLIRAAEIRASANLAAEKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPTQYKNFTTAPAICHNGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGDCDVVIGIVNNTVYDPLQPELDS
Spike glycoprotein C 1121 Severe Acute Respiratory Syndrome Coronavirus 2 AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPGSASSVASQSIIAYTMSLGEENSVAYSNNSIAIPTNFTISVTTEIIPVSMQKVSVDCTMYICGDSEECSNLLLQYGSFCTQLNRALHEIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSAIEDLLFNKVTLADAGFIKGYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAAYTSALLAGTITAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNKAIGKIQDGLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLINGRLQALNTYVTQQLIRAAEIRASANLAAEKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPTQYKNFTTAPAICHNGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGDCDVVIGIVNNTVYDPLQPELDS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-10-06
Deposition Author(s): Harshbarger, W. , Williams, J.A.