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FASTA Sequence PDB Format mmCIF Format
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8ENV

In situ cryo-em structure of pseudomonas phage e217 tail baseplate in c6 map

PDB DOI: 10.2210/pdb8env/pdb

Classification: VIRUS
Organism(s): Pseudomonas Phage Vb_Paem_E217

Deposited: 2022-09-30
Deposition Author(s): Cingolani, G. , Hou, C. , Li, F.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.42 Å

8env
Literature

In situ cryo-em structure of pseudomonas phage e217 tail baseplate in c6 map

Cingolani, G. , Hou, C. , Li, F.

Primary Citation of Related Structures: 8ENV


Proteins
Molecule Chains Sequence Length Organism Sequence
Structural protein gp33 A 102 Pseudomonas Phage Vb_Paem_E217 KIPLTAVPNQAISFNAGSSYWKIRLYQNMDMMNADISRDGVIVCHGVRCFGGIPLLQYSHQYRPDYGNFVFDRDADWTLFGDGINLFYLDGAEFAEYQALAT
Sheath initiator gp34 B 108 Pseudomonas Phage Vb_Paem_E217 STSTIRTGTNNDILLDDNGNMVILRDVEACAQDVRAAMLMRTGENIFDVNSGVGYFEYIFSPQKSYDDARKSIADAILSSPDVTGIEQLDIDITGEVFGVDAKVITIH
Ripcord gp36 C 152 Pseudomonas Phage Vb_Paem_E217 MINVSGFGTGIVIVSASSFPMGFSLSKFADDESPISSKELEPFGYEMLYDGGLFAFDKAAPLEVSVSVIAGSEDDINLRILLNSKKGSFRFLPGIIPDMTTLVATLPDGGRTVLSNGTILKGPAIDTIQNTGRRKGNTYTFVFGSYLGAQTA
Baseplate_J domain-containing protein gp44 D 417 Pseudomonas Phage Vb_Paem_E217 MANYNYIVDTGVIVADTADVLSDVEAEFRAALGANINLAASTPQGSLVAAEAIARSSVMRNEARIANTINPNVSFGTFLDAICALMGIERGSDLSTFGYGVQVTGRSQTRISTGSRVQTPAGAIFTVMSDVTIPAGGVATIDIKSQEYGNIPLPVGNLIIIDGTIGWSGAKVIASTRVDPGSRQMSDAELKNARVNRLAIQGRNSTMAIKAYVSAVPNVTSVNVIENNTGAVQVVNGVSFTLPYAVWVCVAGNPDKQAVADALWAAHNGGTPWDYGATNNGVPVDGPNGVPVRDPASGRKYVVKWTTPIMYDGYVNVTVQQGSSSVAPEAIQNAVVNYAQGKVEGEEGLVVGASLSAFEVAGAIAREIPGIYIKLCQVACVAAGSPAPAPGDFTSEYVMSAFGQATISVGNVRVTFV
Structural protein gp45 E 500 Pseudomonas Phage Vb_Paem_E217 LPAYNSDIQQALKWLHNQAPGITGLIQRKAQWYDRFSRQFWANWERDVFHLKTANPFGLMVWCIILGTPSKGFGLYPKNSSWAFGRLRQNFIYSGTQVPPPADASPGGNFYGGGNAEILNLDEIRKVLQLRYVALISNGSIAYINRMLRYIFNDDEPWDEATGLYFYLMDSTGENGPVENLAVYRKDWEGMVLLSSSPRTNHVLTSTPASDADWPGVDPAASGIPVTVETASATAPDGSATVCKLTKPAGSTAYVSAPIDGPLGSGSTVTFSFFAKAGSTRFIAIQSAADFPSRADAVFDLDSGNVISDQMLDSSVVSARMIRLENGWWRCVLTTKTVSSSFRAAYVAPAETNFSWIDSNSSAAIDVLIWGAQIELGDTPTGYLKTTGAPVTITDYVLQNAQTGTVKFTQPLPTGVEAYWTGDWKGGTAAEPARFAVGNGTQDTFTLSDPAYIGLPTSGAFKLEYRVGPALNLSPQLINLMNDRAVGIMPTCAGCDVKVI
Structural protein gp33 F 102 Pseudomonas Phage Vb_Paem_E217 KIPLTAVPNQAISFNAGSSYWKIRLYQNMDMMNADISRDGVIVCHGVRCFGGIPLLQYSHQYRPDYGNFVFDRDADWTLFGDGINLFYLDGAEFAEYQALAT
Sheath initiator gp34 G 108 Pseudomonas Phage Vb_Paem_E217 STSTIRTGTNNDILLDDNGNMVILRDVEACAQDVRAAMLMRTGENIFDVNSGVGYFEYIFSPQKSYDDARKSIADAILSSPDVTGIEQLDIDITGEVFGVDAKVITIH
Structural protein gp33 L 102 Pseudomonas Phage Vb_Paem_E217 KIPLTAVPNQAISFNAGSSYWKIRLYQNMDMMNADISRDGVIVCHGVRCFGGIPLLQYSHQYRPDYGNFVFDRDADWTLFGDGINLFYLDGAEFAEYQALAT
Structural protein gp33 Q 102 Pseudomonas Phage Vb_Paem_E217 KIPLTAVPNQAISFNAGSSYWKIRLYQNMDMMNADISRDGVIVCHGVRCFGGIPLLQYSHQYRPDYGNFVFDRDADWTLFGDGINLFYLDGAEFAEYQALAT
Structural protein gp33 V 102 Pseudomonas Phage Vb_Paem_E217 KIPLTAVPNQAISFNAGSSYWKIRLYQNMDMMNADISRDGVIVCHGVRCFGGIPLLQYSHQYRPDYGNFVFDRDADWTLFGDGINLFYLDGAEFAEYQALAT
Ripcord gp36 H 152 Pseudomonas Phage Vb_Paem_E217 MINVSGFGTGIVIVSASSFPMGFSLSKFADDESPISSKELEPFGYEMLYDGGLFAFDKAAPLEVSVSVIAGSEDDINLRILLNSKKGSFRFLPGIIPDMTTLVATLPDGGRTVLSNGTILKGPAIDTIQNTGRRKGNTYTFVFGSYLGAQTA
Sheath initiator gp34 M 108 Pseudomonas Phage Vb_Paem_E217 STSTIRTGTNNDILLDDNGNMVILRDVEACAQDVRAAMLMRTGENIFDVNSGVGYFEYIFSPQKSYDDARKSIADAILSSPDVTGIEQLDIDITGEVFGVDAKVITIH
Sheath initiator gp34 R 108 Pseudomonas Phage Vb_Paem_E217 STSTIRTGTNNDILLDDNGNMVILRDVEACAQDVRAAMLMRTGENIFDVNSGVGYFEYIFSPQKSYDDARKSIADAILSSPDVTGIEQLDIDITGEVFGVDAKVITIH
Sheath initiator gp34 W 108 Pseudomonas Phage Vb_Paem_E217 STSTIRTGTNNDILLDDNGNMVILRDVEACAQDVRAAMLMRTGENIFDVNSGVGYFEYIFSPQKSYDDARKSIADAILSSPDVTGIEQLDIDITGEVFGVDAKVITIH
Baseplate_J domain-containing protein gp44 I 417 Pseudomonas Phage Vb_Paem_E217 MANYNYIVDTGVIVADTADVLSDVEAEFRAALGANINLAASTPQGSLVAAEAIARSSVMRNEARIANTINPNVSFGTFLDAICALMGIERGSDLSTFGYGVQVTGRSQTRISTGSRVQTPAGAIFTVMSDVTIPAGGVATIDIKSQEYGNIPLPVGNLIIIDGTIGWSGAKVIASTRVDPGSRQMSDAELKNARVNRLAIQGRNSTMAIKAYVSAVPNVTSVNVIENNTGAVQVVNGVSFTLPYAVWVCVAGNPDKQAVADALWAAHNGGTPWDYGATNNGVPVDGPNGVPVRDPASGRKYVVKWTTPIMYDGYVNVTVQQGSSSVAPEAIQNAVVNYAQGKVEGEEGLVVGASLSAFEVAGAIAREIPGIYIKLCQVACVAAGSPAPAPGDFTSEYVMSAFGQATISVGNVRVTFV
Ripcord gp36 N 152 Pseudomonas Phage Vb_Paem_E217 MINVSGFGTGIVIVSASSFPMGFSLSKFADDESPISSKELEPFGYEMLYDGGLFAFDKAAPLEVSVSVIAGSEDDINLRILLNSKKGSFRFLPGIIPDMTTLVATLPDGGRTVLSNGTILKGPAIDTIQNTGRRKGNTYTFVFGSYLGAQTA
Ripcord gp36 S 152 Pseudomonas Phage Vb_Paem_E217 MINVSGFGTGIVIVSASSFPMGFSLSKFADDESPISSKELEPFGYEMLYDGGLFAFDKAAPLEVSVSVIAGSEDDINLRILLNSKKGSFRFLPGIIPDMTTLVATLPDGGRTVLSNGTILKGPAIDTIQNTGRRKGNTYTFVFGSYLGAQTA
Ripcord gp36 X 152 Pseudomonas Phage Vb_Paem_E217 MINVSGFGTGIVIVSASSFPMGFSLSKFADDESPISSKELEPFGYEMLYDGGLFAFDKAAPLEVSVSVIAGSEDDINLRILLNSKKGSFRFLPGIIPDMTTLVATLPDGGRTVLSNGTILKGPAIDTIQNTGRRKGNTYTFVFGSYLGAQTA
Structural protein gp45 J 500 Pseudomonas Phage Vb_Paem_E217 LPAYNSDIQQALKWLHNQAPGITGLIQRKAQWYDRFSRQFWANWERDVFHLKTANPFGLMVWCIILGTPSKGFGLYPKNSSWAFGRLRQNFIYSGTQVPPPADASPGGNFYGGGNAEILNLDEIRKVLQLRYVALISNGSIAYINRMLRYIFNDDEPWDEATGLYFYLMDSTGENGPVENLAVYRKDWEGMVLLSSSPRTNHVLTSTPASDADWPGVDPAASGIPVTVETASATAPDGSATVCKLTKPAGSTAYVSAPIDGPLGSGSTVTFSFFAKAGSTRFIAIQSAADFPSRADAVFDLDSGNVISDQMLDSSVVSARMIRLENGWWRCVLTTKTVSSSFRAAYVAPAETNFSWIDSNSSAAIDVLIWGAQIELGDTPTGYLKTTGAPVTITDYVLQNAQTGTVKFTQPLPTGVEAYWTGDWKGGTAAEPARFAVGNGTQDTFTLSDPAYIGLPTSGAFKLEYRVGPALNLSPQLINLMNDRAVGIMPTCAGCDVKVI
Baseplate_J domain-containing protein gp44 O 417 Pseudomonas Phage Vb_Paem_E217 MANYNYIVDTGVIVADTADVLSDVEAEFRAALGANINLAASTPQGSLVAAEAIARSSVMRNEARIANTINPNVSFGTFLDAICALMGIERGSDLSTFGYGVQVTGRSQTRISTGSRVQTPAGAIFTVMSDVTIPAGGVATIDIKSQEYGNIPLPVGNLIIIDGTIGWSGAKVIASTRVDPGSRQMSDAELKNARVNRLAIQGRNSTMAIKAYVSAVPNVTSVNVIENNTGAVQVVNGVSFTLPYAVWVCVAGNPDKQAVADALWAAHNGGTPWDYGATNNGVPVDGPNGVPVRDPASGRKYVVKWTTPIMYDGYVNVTVQQGSSSVAPEAIQNAVVNYAQGKVEGEEGLVVGASLSAFEVAGAIAREIPGIYIKLCQVACVAAGSPAPAPGDFTSEYVMSAFGQATISVGNVRVTFV
Baseplate_J domain-containing protein gp44 T 417 Pseudomonas Phage Vb_Paem_E217 MANYNYIVDTGVIVADTADVLSDVEAEFRAALGANINLAASTPQGSLVAAEAIARSSVMRNEARIANTINPNVSFGTFLDAICALMGIERGSDLSTFGYGVQVTGRSQTRISTGSRVQTPAGAIFTVMSDVTIPAGGVATIDIKSQEYGNIPLPVGNLIIIDGTIGWSGAKVIASTRVDPGSRQMSDAELKNARVNRLAIQGRNSTMAIKAYVSAVPNVTSVNVIENNTGAVQVVNGVSFTLPYAVWVCVAGNPDKQAVADALWAAHNGGTPWDYGATNNGVPVDGPNGVPVRDPASGRKYVVKWTTPIMYDGYVNVTVQQGSSSVAPEAIQNAVVNYAQGKVEGEEGLVVGASLSAFEVAGAIAREIPGIYIKLCQVACVAAGSPAPAPGDFTSEYVMSAFGQATISVGNVRVTFV
Baseplate_J domain-containing protein gp44 Y 417 Pseudomonas Phage Vb_Paem_E217 MANYNYIVDTGVIVADTADVLSDVEAEFRAALGANINLAASTPQGSLVAAEAIARSSVMRNEARIANTINPNVSFGTFLDAICALMGIERGSDLSTFGYGVQVTGRSQTRISTGSRVQTPAGAIFTVMSDVTIPAGGVATIDIKSQEYGNIPLPVGNLIIIDGTIGWSGAKVIASTRVDPGSRQMSDAELKNARVNRLAIQGRNSTMAIKAYVSAVPNVTSVNVIENNTGAVQVVNGVSFTLPYAVWVCVAGNPDKQAVADALWAAHNGGTPWDYGATNNGVPVDGPNGVPVRDPASGRKYVVKWTTPIMYDGYVNVTVQQGSSSVAPEAIQNAVVNYAQGKVEGEEGLVVGASLSAFEVAGAIAREIPGIYIKLCQVACVAAGSPAPAPGDFTSEYVMSAFGQATISVGNVRVTFV
Structural protein gp45 K 500 Pseudomonas Phage Vb_Paem_E217 LPAYNSDIQQALKWLHNQAPGITGLIQRKAQWYDRFSRQFWANWERDVFHLKTANPFGLMVWCIILGTPSKGFGLYPKNSSWAFGRLRQNFIYSGTQVPPPADASPGGNFYGGGNAEILNLDEIRKVLQLRYVALISNGSIAYINRMLRYIFNDDEPWDEATGLYFYLMDSTGENGPVENLAVYRKDWEGMVLLSSSPRTNHVLTSTPASDADWPGVDPAASGIPVTVETASATAPDGSATVCKLTKPAGSTAYVSAPIDGPLGSGSTVTFSFFAKAGSTRFIAIQSAADFPSRADAVFDLDSGNVISDQMLDSSVVSARMIRLENGWWRCVLTTKTVSSSFRAAYVAPAETNFSWIDSNSSAAIDVLIWGAQIELGDTPTGYLKTTGAPVTITDYVLQNAQTGTVKFTQPLPTGVEAYWTGDWKGGTAAEPARFAVGNGTQDTFTLSDPAYIGLPTSGAFKLEYRVGPALNLSPQLINLMNDRAVGIMPTCAGCDVKVI
Structural protein gp45 P 500 Pseudomonas Phage Vb_Paem_E217 LPAYNSDIQQALKWLHNQAPGITGLIQRKAQWYDRFSRQFWANWERDVFHLKTANPFGLMVWCIILGTPSKGFGLYPKNSSWAFGRLRQNFIYSGTQVPPPADASPGGNFYGGGNAEILNLDEIRKVLQLRYVALISNGSIAYINRMLRYIFNDDEPWDEATGLYFYLMDSTGENGPVENLAVYRKDWEGMVLLSSSPRTNHVLTSTPASDADWPGVDPAASGIPVTVETASATAPDGSATVCKLTKPAGSTAYVSAPIDGPLGSGSTVTFSFFAKAGSTRFIAIQSAADFPSRADAVFDLDSGNVISDQMLDSSVVSARMIRLENGWWRCVLTTKTVSSSFRAAYVAPAETNFSWIDSNSSAAIDVLIWGAQIELGDTPTGYLKTTGAPVTITDYVLQNAQTGTVKFTQPLPTGVEAYWTGDWKGGTAAEPARFAVGNGTQDTFTLSDPAYIGLPTSGAFKLEYRVGPALNLSPQLINLMNDRAVGIMPTCAGCDVKVI
Structural protein gp45 U 500 Pseudomonas Phage Vb_Paem_E217 LPAYNSDIQQALKWLHNQAPGITGLIQRKAQWYDRFSRQFWANWERDVFHLKTANPFGLMVWCIILGTPSKGFGLYPKNSSWAFGRLRQNFIYSGTQVPPPADASPGGNFYGGGNAEILNLDEIRKVLQLRYVALISNGSIAYINRMLRYIFNDDEPWDEATGLYFYLMDSTGENGPVENLAVYRKDWEGMVLLSSSPRTNHVLTSTPASDADWPGVDPAASGIPVTVETASATAPDGSATVCKLTKPAGSTAYVSAPIDGPLGSGSTVTFSFFAKAGSTRFIAIQSAADFPSRADAVFDLDSGNVISDQMLDSSVVSARMIRLENGWWRCVLTTKTVSSSFRAAYVAPAETNFSWIDSNSSAAIDVLIWGAQIELGDTPTGYLKTTGAPVTITDYVLQNAQTGTVKFTQPLPTGVEAYWTGDWKGGTAAEPARFAVGNGTQDTFTLSDPAYIGLPTSGAFKLEYRVGPALNLSPQLINLMNDRAVGIMPTCAGCDVKVI
Structural protein gp45 Z 500 Pseudomonas Phage Vb_Paem_E217 LPAYNSDIQQALKWLHNQAPGITGLIQRKAQWYDRFSRQFWANWERDVFHLKTANPFGLMVWCIILGTPSKGFGLYPKNSSWAFGRLRQNFIYSGTQVPPPADASPGGNFYGGGNAEILNLDEIRKVLQLRYVALISNGSIAYINRMLRYIFNDDEPWDEATGLYFYLMDSTGENGPVENLAVYRKDWEGMVLLSSSPRTNHVLTSTPASDADWPGVDPAASGIPVTVETASATAPDGSATVCKLTKPAGSTAYVSAPIDGPLGSGSTVTFSFFAKAGSTRFIAIQSAADFPSRADAVFDLDSGNVISDQMLDSSVVSARMIRLENGWWRCVLTTKTVSSSFRAAYVAPAETNFSWIDSNSSAAIDVLIWGAQIELGDTPTGYLKTTGAPVTITDYVLQNAQTGTVKFTQPLPTGVEAYWTGDWKGGTAAEPARFAVGNGTQDTFTLSDPAYIGLPTSGAFKLEYRVGPALNLSPQLINLMNDRAVGIMPTCAGCDVKVI
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-09-30
Deposition Author(s): Cingolani, G. , Hou, C. , Li, F.