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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8EMH

Cryoem characterization of a unique aaa+ brxl phage restriction factor

PDB DOI: 10.2210/pdb8emh/pdb

Classification: ANTIMICROBIAL PROTEIN
Organism(s): Acinetobacter Sp. Neb 394 , Synthetic Construct

Deposited: 2022-09-27
Deposition Author(s): Shen, B.W. , Stoddard, B.L.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.63 Å

8emh
Literature

Cryoem characterization of a unique aaa+ brxl phage restriction factor

Shen, B.W. , Stoddard, B.L.

Primary Citation of Related Structures: 8EMH


Proteins
Molecule Chains Sequence Length Organism Sequence
Protease Lon-related BREX system protein BrxL A 679 Acinetobacter Sp. Neb 394 , Synthetic Construct MESANDKELDQLLNEHFAGRVVRKDLTKLIKEGANVPVYVLEYLLGMYCASDDPEIIEQGLRNVKTVLAENYVRPDEAEKVKSLVRERGSYKVIDRVTVKLNERKDKYEASFSNLGIKDAEISAGIVKEYEKLLVGGIWVIATLSYYFEEGQTSSPFGVSLLKPIQMPNMNMDELFSGRAALSTDQWRESLIRSIGMEPASLKEDVQWHLLARMVPFVENNYNVCELGPRGTGKSHIYKECSPNSILVSGGQTTVANLFYNMSSRRIGLVGLWDVVAFDQVAGISFKDKDGVQIMKDYMASGSFARGREQMEASASMVFVGNINQSVESLVKTSHLLAPFPEAMIDSAFFDRFHAYIPGWEIPKMRPEFFTNRYGLIVDYLAEFFREMRKRSFADSIEKYFKLGNNLNQRDVIAVRKTVSGLMKLLYPHGQFNKEDVRQCLEYALQVRRRVKEQLKKIGGMEFYDVHFSYIDNDTLEEHFVSVKEQGGGGLIPEGPAKPGFLYTIGLSNKGMPGLYRLELQVTKGSGKLATSGLWNSSSAKEQVKIAFDYFKANASRISGGSKVMEHDFHLHVVELQNTGPLSHLALPSLVAFASGLLGRSVQSQMVVLGDMSLGGSVTPVESIAECLQVAFDAGAKKVALPMSSAADIPTIPVELFTKFQTSFYADPVDAVFKGLGVD
Protease Lon-related BREX system protein BrxL B 679 Acinetobacter Sp. Neb 394 , Synthetic Construct MESANDKELDQLLNEHFAGRVVRKDLTKLIKEGANVPVYVLEYLLGMYCASDDPEIIEQGLRNVKTVLAENYVRPDEAEKVKSLVRERGSYKVIDRVTVKLNERKDKYEASFSNLGIKDAEISAGIVKEYEKLLVGGIWVIATLSYYFEEGQTSSPFGVSLLKPIQMPNMNMDELFSGRAALSTDQWRESLIRSIGMEPASLKEDVQWHLLARMVPFVENNYNVCELGPRGTGKSHIYKECSPNSILVSGGQTTVANLFYNMSSRRIGLVGLWDVVAFDQVAGISFKDKDGVQIMKDYMASGSFARGREQMEASASMVFVGNINQSVESLVKTSHLLAPFPEAMIDSAFFDRFHAYIPGWEIPKMRPEFFTNRYGLIVDYLAEFFREMRKRSFADSIEKYFKLGNNLNQRDVIAVRKTVSGLMKLLYPHGQFNKEDVRQCLEYALQVRRRVKEQLKKIGGMEFYDVHFSYIDNDTLEEHFVSVKEQGGGGLIPEGPAKPGFLYTIGLSNKGMPGLYRLELQVTKGSGKLATSGLWNSSSAKEQVKIAFDYFKANASRISGGSKVMEHDFHLHVVELQNTGPLSHLALPSLVAFASGLLGRSVQSQMVVLGDMSLGGSVTPVESIAECLQVAFDAGAKKVALPMSSAADIPTIPVELFTKFQTSFYADPVDAVFKGLGVD
Protease Lon-related BREX system protein BrxL C 679 Acinetobacter Sp. Neb 394 , Synthetic Construct MESANDKELDQLLNEHFAGRVVRKDLTKLIKEGANVPVYVLEYLLGMYCASDDPEIIEQGLRNVKTVLAENYVRPDEAEKVKSLVRERGSYKVIDRVTVKLNERKDKYEASFSNLGIKDAEISAGIVKEYEKLLVGGIWVIATLSYYFEEGQTSSPFGVSLLKPIQMPNMNMDELFSGRAALSTDQWRESLIRSIGMEPASLKEDVQWHLLARMVPFVENNYNVCELGPRGTGKSHIYKECSPNSILVSGGQTTVANLFYNMSSRRIGLVGLWDVVAFDQVAGISFKDKDGVQIMKDYMASGSFARGREQMEASASMVFVGNINQSVESLVKTSHLLAPFPEAMIDSAFFDRFHAYIPGWEIPKMRPEFFTNRYGLIVDYLAEFFREMRKRSFADSIEKYFKLGNNLNQRDVIAVRKTVSGLMKLLYPHGQFNKEDVRQCLEYALQVRRRVKEQLKKIGGMEFYDVHFSYIDNDTLEEHFVSVKEQGGGGLIPEGPAKPGFLYTIGLSNKGMPGLYRLELQVTKGSGKLATSGLWNSSSAKEQVKIAFDYFKANASRISGGSKVMEHDFHLHVVELQNTGPLSHLALPSLVAFASGLLGRSVQSQMVVLGDMSLGGSVTPVESIAECLQVAFDAGAKKVALPMSSAADIPTIPVELFTKFQTSFYADPVDAVFKGLGVD
Protease Lon-related BREX system protein BrxL D 679 Acinetobacter Sp. Neb 394 , Synthetic Construct MESANDKELDQLLNEHFAGRVVRKDLTKLIKEGANVPVYVLEYLLGMYCASDDPEIIEQGLRNVKTVLAENYVRPDEAEKVKSLVRERGSYKVIDRVTVKLNERKDKYEASFSNLGIKDAEISAGIVKEYEKLLVGGIWVIATLSYYFEEGQTSSPFGVSLLKPIQMPNMNMDELFSGRAALSTDQWRESLIRSIGMEPASLKEDVQWHLLARMVPFVENNYNVCELGPRGTGKSHIYKECSPNSILVSGGQTTVANLFYNMSSRRIGLVGLWDVVAFDQVAGISFKDKDGVQIMKDYMASGSFARGREQMEASASMVFVGNINQSVESLVKTSHLLAPFPEAMIDSAFFDRFHAYIPGWEIPKMRPEFFTNRYGLIVDYLAEFFREMRKRSFADSIEKYFKLGNNLNQRDVIAVRKTVSGLMKLLYPHGQFNKEDVRQCLEYALQVRRRVKEQLKKIGGMEFYDVHFSYIDNDTLEEHFVSVKEQGGGGLIPEGPAKPGFLYTIGLSNKGMPGLYRLELQVTKGSGKLATSGLWNSSSAKEQVKIAFDYFKANASRISGGSKVMEHDFHLHVVELQNTGPLSHLALPSLVAFASGLLGRSVQSQMVVLGDMSLGGSVTPVESIAECLQVAFDAGAKKVALPMSSAADIPTIPVELFTKFQTSFYADPVDAVFKGLGVD
Protease Lon-related BREX system protein BrxL E 679 Acinetobacter Sp. Neb 394 , Synthetic Construct MESANDKELDQLLNEHFAGRVVRKDLTKLIKEGANVPVYVLEYLLGMYCASDDPEIIEQGLRNVKTVLAENYVRPDEAEKVKSLVRERGSYKVIDRVTVKLNERKDKYEASFSNLGIKDAEISAGIVKEYEKLLVGGIWVIATLSYYFEEGQTSSPFGVSLLKPIQMPNMNMDELFSGRAALSTDQWRESLIRSIGMEPASLKEDVQWHLLARMVPFVENNYNVCELGPRGTGKSHIYKECSPNSILVSGGQTTVANLFYNMSSRRIGLVGLWDVVAFDQVAGISFKDKDGVQIMKDYMASGSFARGREQMEASASMVFVGNINQSVESLVKTSHLLAPFPEAMIDSAFFDRFHAYIPGWEIPKMRPEFFTNRYGLIVDYLAEFFREMRKRSFADSIEKYFKLGNNLNQRDVIAVRKTVSGLMKLLYPHGQFNKEDVRQCLEYALQVRRRVKEQLKKIGGMEFYDVHFSYIDNDTLEEHFVSVKEQGGGGLIPEGPAKPGFLYTIGLSNKGMPGLYRLELQVTKGSGKLATSGLWNSSSAKEQVKIAFDYFKANASRISGGSKVMEHDFHLHVVELQNTGPLSHLALPSLVAFASGLLGRSVQSQMVVLGDMSLGGSVTPVESIAECLQVAFDAGAKKVALPMSSAADIPTIPVELFTKFQTSFYADPVDAVFKGLGVD
Protease Lon-related BREX system protein BrxL F 679 Acinetobacter Sp. Neb 394 , Synthetic Construct MESANDKELDQLLNEHFAGRVVRKDLTKLIKEGANVPVYVLEYLLGMYCASDDPEIIEQGLRNVKTVLAENYVRPDEAEKVKSLVRERGSYKVIDRVTVKLNERKDKYEASFSNLGIKDAEISAGIVKEYEKLLVGGIWVIATLSYYFEEGQTSSPFGVSLLKPIQMPNMNMDELFSGRAALSTDQWRESLIRSIGMEPASLKEDVQWHLLARMVPFVENNYNVCELGPRGTGKSHIYKECSPNSILVSGGQTTVANLFYNMSSRRIGLVGLWDVVAFDQVAGISFKDKDGVQIMKDYMASGSFARGREQMEASASMVFVGNINQSVESLVKTSHLLAPFPEAMIDSAFFDRFHAYIPGWEIPKMRPEFFTNRYGLIVDYLAEFFREMRKRSFADSIEKYFKLGNNLNQRDVIAVRKTVSGLMKLLYPHGQFNKEDVRQCLEYALQVRRRVKEQLKKIGGMEFYDVHFSYIDNDTLEEHFVSVKEQGGGGLIPEGPAKPGFLYTIGLSNKGMPGLYRLELQVTKGSGKLATSGLWNSSSAKEQVKIAFDYFKANASRISGGSKVMEHDFHLHVVELQNTGPLSHLALPSLVAFASGLLGRSVQSQMVVLGDMSLGGSVTPVESIAECLQVAFDAGAKKVALPMSSAADIPTIPVELFTKFQTSFYADPVDAVFKGLGVD
Protease Lon-related BREX system protein BrxL G 679 Acinetobacter Sp. Neb 394 , Synthetic Construct MESANDKELDQLLNEHFAGRVVRKDLTKLIKEGANVPVYVLEYLLGMYCASDDPEIIEQGLRNVKTVLAENYVRPDEAEKVKSLVRERGSYKVIDRVTVKLNERKDKYEASFSNLGIKDAEISAGIVKEYEKLLVGGIWVIATLSYYFEEGQTSSPFGVSLLKPIQMPNMNMDELFSGRAALSTDQWRESLIRSIGMEPASLKEDVQWHLLARMVPFVENNYNVCELGPRGTGKSHIYKECSPNSILVSGGQTTVANLFYNMSSRRIGLVGLWDVVAFDQVAGISFKDKDGVQIMKDYMASGSFARGREQMEASASMVFVGNINQSVESLVKTSHLLAPFPEAMIDSAFFDRFHAYIPGWEIPKMRPEFFTNRYGLIVDYLAEFFREMRKRSFADSIEKYFKLGNNLNQRDVIAVRKTVSGLMKLLYPHGQFNKEDVRQCLEYALQVRRRVKEQLKKIGGMEFYDVHFSYIDNDTLEEHFVSVKEQGGGGLIPEGPAKPGFLYTIGLSNKGMPGLYRLELQVTKGSGKLATSGLWNSSSAKEQVKIAFDYFKANASRISGGSKVMEHDFHLHVVELQNTGPLSHLALPSLVAFASGLLGRSVQSQMVVLGDMSLGGSVTPVESIAECLQVAFDAGAKKVALPMSSAADIPTIPVELFTKFQTSFYADPVDAVFKGLGVD
Protease Lon-related BREX system protein BrxL H 679 Acinetobacter Sp. Neb 394 , Synthetic Construct MESANDKELDQLLNEHFAGRVVRKDLTKLIKEGANVPVYVLEYLLGMYCASDDPEIIEQGLRNVKTVLAENYVRPDEAEKVKSLVRERGSYKVIDRVTVKLNERKDKYEASFSNLGIKDAEISAGIVKEYEKLLVGGIWVIATLSYYFEEGQTSSPFGVSLLKPIQMPNMNMDELFSGRAALSTDQWRESLIRSIGMEPASLKEDVQWHLLARMVPFVENNYNVCELGPRGTGKSHIYKECSPNSILVSGGQTTVANLFYNMSSRRIGLVGLWDVVAFDQVAGISFKDKDGVQIMKDYMASGSFARGREQMEASASMVFVGNINQSVESLVKTSHLLAPFPEAMIDSAFFDRFHAYIPGWEIPKMRPEFFTNRYGLIVDYLAEFFREMRKRSFADSIEKYFKLGNNLNQRDVIAVRKTVSGLMKLLYPHGQFNKEDVRQCLEYALQVRRRVKEQLKKIGGMEFYDVHFSYIDNDTLEEHFVSVKEQGGGGLIPEGPAKPGFLYTIGLSNKGMPGLYRLELQVTKGSGKLATSGLWNSSSAKEQVKIAFDYFKANASRISGGSKVMEHDFHLHVVELQNTGPLSHLALPSLVAFASGLLGRSVQSQMVVLGDMSLGGSVTPVESIAECLQVAFDAGAKKVALPMSSAADIPTIPVELFTKFQTSFYADPVDAVFKGLGVD
Protease Lon-related BREX system protein BrxL I 679 Acinetobacter Sp. Neb 394 , Synthetic Construct MESANDKELDQLLNEHFAGRVVRKDLTKLIKEGANVPVYVLEYLLGMYCASDDPEIIEQGLRNVKTVLAENYVRPDEAEKVKSLVRERGSYKVIDRVTVKLNERKDKYEASFSNLGIKDAEISAGIVKEYEKLLVGGIWVIATLSYYFEEGQTSSPFGVSLLKPIQMPNMNMDELFSGRAALSTDQWRESLIRSIGMEPASLKEDVQWHLLARMVPFVENNYNVCELGPRGTGKSHIYKECSPNSILVSGGQTTVANLFYNMSSRRIGLVGLWDVVAFDQVAGISFKDKDGVQIMKDYMASGSFARGREQMEASASMVFVGNINQSVESLVKTSHLLAPFPEAMIDSAFFDRFHAYIPGWEIPKMRPEFFTNRYGLIVDYLAEFFREMRKRSFADSIEKYFKLGNNLNQRDVIAVRKTVSGLMKLLYPHGQFNKEDVRQCLEYALQVRRRVKEQLKKIGGMEFYDVHFSYIDNDTLEEHFVSVKEQGGGGLIPEGPAKPGFLYTIGLSNKGMPGLYRLELQVTKGSGKLATSGLWNSSSAKEQVKIAFDYFKANASRISGGSKVMEHDFHLHVVELQNTGPLSHLALPSLVAFASGLLGRSVQSQMVVLGDMSLGGSVTPVESIAECLQVAFDAGAKKVALPMSSAADIPTIPVELFTKFQTSFYADPVDAVFKGLGVD
Protease Lon-related BREX system protein BrxL J 679 Acinetobacter Sp. Neb 394 , Synthetic Construct MESANDKELDQLLNEHFAGRVVRKDLTKLIKEGANVPVYVLEYLLGMYCASDDPEIIEQGLRNVKTVLAENYVRPDEAEKVKSLVRERGSYKVIDRVTVKLNERKDKYEASFSNLGIKDAEISAGIVKEYEKLLVGGIWVIATLSYYFEEGQTSSPFGVSLLKPIQMPNMNMDELFSGRAALSTDQWRESLIRSIGMEPASLKEDVQWHLLARMVPFVENNYNVCELGPRGTGKSHIYKECSPNSILVSGGQTTVANLFYNMSSRRIGLVGLWDVVAFDQVAGISFKDKDGVQIMKDYMASGSFARGREQMEASASMVFVGNINQSVESLVKTSHLLAPFPEAMIDSAFFDRFHAYIPGWEIPKMRPEFFTNRYGLIVDYLAEFFREMRKRSFADSIEKYFKLGNNLNQRDVIAVRKTVSGLMKLLYPHGQFNKEDVRQCLEYALQVRRRVKEQLKKIGGMEFYDVHFSYIDNDTLEEHFVSVKEQGGGGLIPEGPAKPGFLYTIGLSNKGMPGLYRLELQVTKGSGKLATSGLWNSSSAKEQVKIAFDYFKANASRISGGSKVMEHDFHLHVVELQNTGPLSHLALPSLVAFASGLLGRSVQSQMVVLGDMSLGGSVTPVESIAECLQVAFDAGAKKVALPMSSAADIPTIPVELFTKFQTSFYADPVDAVFKGLGVD
Protease Lon-related BREX system protein BrxL K 679 Acinetobacter Sp. Neb 394 , Synthetic Construct MESANDKELDQLLNEHFAGRVVRKDLTKLIKEGANVPVYVLEYLLGMYCASDDPEIIEQGLRNVKTVLAENYVRPDEAEKVKSLVRERGSYKVIDRVTVKLNERKDKYEASFSNLGIKDAEISAGIVKEYEKLLVGGIWVIATLSYYFEEGQTSSPFGVSLLKPIQMPNMNMDELFSGRAALSTDQWRESLIRSIGMEPASLKEDVQWHLLARMVPFVENNYNVCELGPRGTGKSHIYKECSPNSILVSGGQTTVANLFYNMSSRRIGLVGLWDVVAFDQVAGISFKDKDGVQIMKDYMASGSFARGREQMEASASMVFVGNINQSVESLVKTSHLLAPFPEAMIDSAFFDRFHAYIPGWEIPKMRPEFFTNRYGLIVDYLAEFFREMRKRSFADSIEKYFKLGNNLNQRDVIAVRKTVSGLMKLLYPHGQFNKEDVRQCLEYALQVRRRVKEQLKKIGGMEFYDVHFSYIDNDTLEEHFVSVKEQGGGGLIPEGPAKPGFLYTIGLSNKGMPGLYRLELQVTKGSGKLATSGLWNSSSAKEQVKIAFDYFKANASRISGGSKVMEHDFHLHVVELQNTGPLSHLALPSLVAFASGLLGRSVQSQMVVLGDMSLGGSVTPVESIAECLQVAFDAGAKKVALPMSSAADIPTIPVELFTKFQTSFYADPVDAVFKGLGVD
Protease Lon-related BREX system protein BrxL L 679 Acinetobacter Sp. Neb 394 , Synthetic Construct MESANDKELDQLLNEHFAGRVVRKDLTKLIKEGANVPVYVLEYLLGMYCASDDPEIIEQGLRNVKTVLAENYVRPDEAEKVKSLVRERGSYKVIDRVTVKLNERKDKYEASFSNLGIKDAEISAGIVKEYEKLLVGGIWVIATLSYYFEEGQTSSPFGVSLLKPIQMPNMNMDELFSGRAALSTDQWRESLIRSIGMEPASLKEDVQWHLLARMVPFVENNYNVCELGPRGTGKSHIYKECSPNSILVSGGQTTVANLFYNMSSRRIGLVGLWDVVAFDQVAGISFKDKDGVQIMKDYMASGSFARGREQMEASASMVFVGNINQSVESLVKTSHLLAPFPEAMIDSAFFDRFHAYIPGWEIPKMRPEFFTNRYGLIVDYLAEFFREMRKRSFADSIEKYFKLGNNLNQRDVIAVRKTVSGLMKLLYPHGQFNKEDVRQCLEYALQVRRRVKEQLKKIGGMEFYDVHFSYIDNDTLEEHFVSVKEQGGGGLIPEGPAKPGFLYTIGLSNKGMPGLYRLELQVTKGSGKLATSGLWNSSSAKEQVKIAFDYFKANASRISGGSKVMEHDFHLHVVELQNTGPLSHLALPSLVAFASGLLGRSVQSQMVVLGDMSLGGSVTPVESIAECLQVAFDAGAKKVALPMSSAADIPTIPVELFTKFQTSFYADPVDAVFKGLGVD

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (64-MER) o 64 NA ACGCGCTACACTAAAAGGGCCCTTAATTCGATCGACTAAGAAAGGGCCCTTTATCGATCGACTG
DNA (63-MER) p 63 NA CAGTCGATCGATAAAGGGGCCCTTTCTTAGTCGATCGAATTAAGGGCCCTTTAGTGTAGCGCG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-09-27
Deposition Author(s): Shen, B.W. , Stoddard, B.L.