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FASTA Sequence PDB Format mmCIF Format
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8DW9

Crystal structure of neutralizing antibody d29 fab in complex with sars-cov-2 spike receptor binding domain (rbd)

PDB DOI: 10.2210/pdb8dw9/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2022-08-01
Deposition Author(s): Reddem, E.R. , Shapiro, L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 4 Å

Literature

Crystal structure of neutralizing antibody d29 fab in complex with sars-cov-2 spike receptor binding domain (rbd)

Reddem, E.R. , Shapiro, L.

Primary Citation of Related Structures: 8DW9


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 A 195 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP
Spike protein S1 B 195 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP
D29 Heavy chain C 219 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QLVESGAEVKKPGSSVKVSCKASGDTFYTFDISWVRQAPGQGLEWMGGISPVFDAPNYAQKFQDRVTITADKSTSTAYMELSSLRSEDTAIYYCVKPTYSNYVWGIGAFDVWGQGTTVTVSSASTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKAA
D29 Heavy chain H 219 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QLVESGAEVKKPGSSVKVSCKASGDTFYTFDISWVRQAPGQGLEWMGGISPVFDAPNYAQKFQDRVTITADKSTSTAYMELSSLRSEDTAIYYCVKPTYSNYVWGIGAFDVWGQGTTVTVSSASTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKAA
D29 Fab light chain D 211 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EIVLTQSPGTLSLSPGERATLSCRASQSVGNIYLAWYQQKPGQAPRLLIYGASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGDSLWTFGQGTKVEIKGQPKANPTVTLFPPSSEELQANKATLVCLIDNFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
D29 Fab light chain L 211 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EIVLTQSPGTLSLSPGERATLSCRASQSVGNIYLAWYQQKPGQAPRLLIYGASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGDSLWTFGQGTKVEIKGQPKANPTVTLFPPSSEELQANKATLVCLIDNFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-08-01
Deposition Author(s): Reddem, E.R. , Shapiro, L.