8DW7
Dna glycosylase muty variant n146s in complex with dna containing the transition state analog 1n paired with d(8-oxo-g)
PDB DOI: 10.2210/pdb8dw7/pdb
Classification: HYDROLASE/DNA Organism(s): Geobacillus Stearothermophilus , Synthetic Construct
Deposited: 2022-07-31 Deposition Author(s): David, S.S. , Demir, M. , Horvath, M.P. , Russelburg, L.P.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.96 Å
Dna glycosylase muty variant n146s in complex with dna containing the transition state analog 1n paired with d(8-oxo-g)
David, S.S. , Demir, M. , Horvath, M.P. , Russelburg, L.P.
Primary Citation of Related Structures: 8DW7
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Adenine DNA glycosylase | A | 365 | Geobacillus Stearothermophilus , Synthetic Construct | MTRETERFPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVDGSVMRVLSRLFLVTDDIAKPSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMKKTAVKQVPLAVAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGADGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHLVWQLTVFPGRLVHGGPVEEPYRLAPEDELKAYAFPVSHQRVWREYKEWASGVRRP |
| Adenine DNA glycosylase | D | 365 | Geobacillus Stearothermophilus , Synthetic Construct | MTRETERFPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVDGSVMRVLSRLFLVTDDIAKPSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMKKTAVKQVPLAVAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGADGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHLVWQLTVFPGRLVHGGPVEEPYRLAPEDELKAYAFPVSHQRVWREYKEWASGVRRP |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*AP*AP*GP*AP*CP*(8OG)P*TP*GP*GP*AP*C)-3') | b | 11 | NA | AAGACGTGGAC |
| DNA (5'-D(*AP*AP*GP*AP*CP*(8OG)P*TP*GP*GP*AP*C)-3') | e | 11 | NA | AAGACGTGGAC |
| DNA (5'-D(P*GP*TP*CP*CP*AP*(NR1)P*GP*TP*CP*T)-3') | c | 11 | NA | TGTCCAXGTCT |
| DNA (5'-D(P*GP*TP*CP*CP*AP*(NR1)P*GP*TP*CP*T)-3') | f | 11 | NA | TGTCCAXGTCT |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2022-07-31 Deposition Author(s): David, S.S. , Demir, M. , Horvath, M.P. , Russelburg, L.P.