PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8DVP

Glycosylase muty variant n146s in complex with dna containing d(8-oxo-g) paired with substrate purine

PDB DOI: 10.2210/pdb8dvp/pdb

Classification: HYDROLASE/DNA
Organism(s): Geobacillus Stearothermophilus , Synthetic Construct

Deposited: 2022-07-29
Deposition Author(s): David, S.S. , Demir, M. , Horvath, M.P. , Russelburg, L.P.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.54 Å

Literature

Glycosylase muty variant n146s in complex with dna containing d(8-oxo-g) paired with substrate purine

David, S.S. , Demir, M. , Horvath, M.P. , Russelburg, L.P.

Primary Citation of Related Structures: 8DVP


Proteins
Molecule Chains Sequence Length Organism Sequence
Adenine DNA glycosylase A 365 Geobacillus Stearothermophilus , Synthetic Construct MTRETERFPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVDGSVMRVLSRLFLVTDDIAKPSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMKKTAVKQVPLAVAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGADGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHLVWQLTVFPGRLVHGGPVEEPYRLAPEDELKAYAFPVSHQRVWREYKEWASGVRRP

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*AP*GP*AP*CP*(8OG)P*TP*GP*GP*AP*C)-3') b 11 NA AAGACGTGGAC
DNA (5'-D(*TP*GP*TP*CP*CP*AP*(PRN)P*GP*TP*CP*T)-3') c 11 NA TGTCCAAGTCT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-07-29
Deposition Author(s): David, S.S. , Demir, M. , Horvath, M.P. , Russelburg, L.P.