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8DVD

Cryo-em structure of sivmac239 sos-2p env trimer in complex with human bnab pgt145

PDB DOI: 10.2210/pdb8dvd/pdb

Classification: VIRAL PROTEIN/Immune System
Organism(s): Homo Sapiens , Simian Immunodeficiency Virus

Deposited: 2022-07-28
Deposition Author(s): Gorman, J. , Kwong, P.D.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.12 Å

8dvd
Literature

Cryo-em structure of sivmac239 sos-2p env trimer in complex with human bnab pgt145

Gorman, J. , Kwong, P.D.

Primary Citation of Related Structures: 8DVD


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein gp160 A 148 Homo Sapiens , Simian Immunodeficiency Virus GVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQLLDVPKRQQELLRLPVWGTKNLQTRVTAIEKYLKDQAQLNAWGCAFRQVCCTTVPWPNASLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLN
Envelope glycoprotein gp160 B 148 Homo Sapiens , Simian Immunodeficiency Virus GVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQLLDVPKRQQELLRLPVWGTKNLQTRVTAIEKYLKDQAQLNAWGCAFRQVCCTTVPWPNASLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLN
Envelope glycoprotein gp160 C 148 Homo Sapiens , Simian Immunodeficiency Virus GVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQLLDVPKRQQELLRLPVWGTKNLQTRVTAIEKYLKDQAQLNAWGCAFRQVCCTTVPWPNASLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLN
Envelope glycoprotein gp160 E 500 Homo Sapiens , Simian Immunodeficiency Virus TLYVTVFYGVPAWRNATIPLFCATKNRDTWGTTQCLPDNGDYSEVALNVTESFDAWNNTVTEQAIEDVWQLFETSIKPCVKLSPLCITMRCNKSETDRWGLTKSITTTASTTSTTASAKVDMVNETSSCIAQDNCTGLEQEQMISCKFNMTGLKRDKTKEYNETWYSADLVCEQGNNTGNESRCYMNHCNTSVIQESCDKHYWDAIRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTYIYWHGRDNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCWFGGKWKDAIKEVKQTIVKHPRYTGTNNTDKINLTAPGGGDPEVTFMWTNCRGEFLYCKMNWFLNWVEDRNTANQKPKEQHKRNYVPCHIRQIINTWHKVGKNVYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGLAPTDCKRYTTGGTSR
Envelope glycoprotein gp160 F 500 Homo Sapiens , Simian Immunodeficiency Virus TLYVTVFYGVPAWRNATIPLFCATKNRDTWGTTQCLPDNGDYSEVALNVTESFDAWNNTVTEQAIEDVWQLFETSIKPCVKLSPLCITMRCNKSETDRWGLTKSITTTASTTSTTASAKVDMVNETSSCIAQDNCTGLEQEQMISCKFNMTGLKRDKTKEYNETWYSADLVCEQGNNTGNESRCYMNHCNTSVIQESCDKHYWDAIRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTYIYWHGRDNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCWFGGKWKDAIKEVKQTIVKHPRYTGTNNTDKINLTAPGGGDPEVTFMWTNCRGEFLYCKMNWFLNWVEDRNTANQKPKEQHKRNYVPCHIRQIINTWHKVGKNVYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGLAPTDCKRYTTGGTSR
Envelope glycoprotein gp160 G 500 Homo Sapiens , Simian Immunodeficiency Virus TLYVTVFYGVPAWRNATIPLFCATKNRDTWGTTQCLPDNGDYSEVALNVTESFDAWNNTVTEQAIEDVWQLFETSIKPCVKLSPLCITMRCNKSETDRWGLTKSITTTASTTSTTASAKVDMVNETSSCIAQDNCTGLEQEQMISCKFNMTGLKRDKTKEYNETWYSADLVCEQGNNTGNESRCYMNHCNTSVIQESCDKHYWDAIRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTYIYWHGRDNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCWFGGKWKDAIKEVKQTIVKHPRYTGTNNTDKINLTAPGGGDPEVTFMWTNCRGEFLYCKMNWFLNWVEDRNTANQKPKEQHKRNYVPCHIRQIINTWHKVGKNVYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGLAPTDCKRYTTGGTSR
PGT145 Heavy H 244 Homo Sapiens , Simian Immunodeficiency Virus QVQLVQSGAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLTADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
PGT145 Light L 219 Homo Sapiens , Simian Immunodeficiency Virus EVVITQSPLFLPVTPGEAASLSCKCSHSLQHSTGANYLAWYLQRPGQTPRLLIHLATHRASGVPDRFSGSGSGTDFTLKISRVESDDVGTYYCMQGLHSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-07-28
Deposition Author(s): Gorman, J. , Kwong, P.D.