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8DTT

Crystal structure of sars-cov-2 spike stem helix peptide in complex with neutralizing antibody cov93-03

PDB DOI: 10.2210/pdb8dtt/pdb

Classification: IMMUNE SYSTEM
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2022-07-26
Deposition Author(s): Lee, C.C.D. , Lin, T.H. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.75 Å

8dtt
Literature

Crystal structure of sars-cov-2 spike stem helix peptide in complex with neutralizing antibody cov93-03

Lee, C.C.D. , Lin, T.H. , Wilson, I.A.

Primary Citation of Related Structures: 8DTT


Proteins
Molecule Chains Sequence Length Organism Sequence
COV93-03 heavy chain A 218 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) QLQLVQSGAEVKKPGASVKLSCKASGNTFTSHYIHWVRQAPGQGPEWMGIINPSGSGTRYAQKFQGRVTMTRDTSTSTVYMELVSLRFEDTAVYYCAGDYYLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
COV93-03 heavy chain E 218 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) QLQLVQSGAEVKKPGASVKLSCKASGNTFTSHYIHWVRQAPGQGPEWMGIINPSGSGTRYAQKFQGRVTMTRDTSTSTVYMELVSLRFEDTAVYYCAGDYYLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
COV93-03 light chain B 217 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) EFVLTQSPGTLSLSPGERATLSCRASQSVTSNYLAWYQQKPGQAPRLLIFGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPMYTFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
COV93-03 light chain F 217 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) EFVLTQSPGTLSLSPGERATLSCRASQSVTSNYLAWYQQKPGQAPRLLIFGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPMYTFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Spike protein S2' stem helix peptide G 15 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) FKEELDKYFKNHTSP
Spike protein S2' stem helix peptide J 15 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) FKEELDKYFKNHTSP
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-07-26
Deposition Author(s): Lee, C.C.D. , Lin, T.H. , Wilson, I.A.