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8DTO
Vaccine elicited antibody mu89 bound to ch848.d949.10.17_n133d_n138t.ds.sosip.664 hiv-1 env trimer
PDB DOI: 10.2210/pdb8dto/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Anopheles Darlingi , Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes
Deposited: 2022-07-26 Deposition Author(s): Acharya, P. , Stalls, V.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.57 Å
Vaccine elicited antibody mu89 bound to ch848.d949.10.17_n133d_n138t.ds.sosip.664 hiv-1 env trimer
Primary Citation of Related Structures: 8DTO
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CH848.3.D0949.10.17chim.6R.DS.SOSIP.664_N133D_N138T gp120 | E | 487 | Anopheles Darlingi , Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes | MGSLQPLATLYLLGMLVASVLAAENLWVTVYYGVPVWKEAKTTLFCASDARAYEKEVHNVWATHACVPTDPSPQELVLGNVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLICSDATVKTGTVEEMKNCSFNTTTEIRDKEKKEYALFYKPDIVPLSETNNTSEYRLINCNTSACTQACPKVTFEPIPIHYCAPAGYAILKCNDETFNGTGPCSNVSTVQCTHGIRPVVSTQLLLNGSLAEKEIVIRSENLTNNAKIIIVHLHTPVEIVCTRPNNNTRKSVRIGPGQTFYATGDIIGDIKQAHCNISEEKWNDTLQKVGIELQKHFPNKTIKYNQSAGGDMEITTHSFNCGGEFFYCNTSNLFNGTYNGTYISTNSSANSTSTITLQCRIKQIINMWQGVGRCMYAPPIAGNITCRSNITGLLLTRDGGTNSNETETFRPAGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVG |
| CH848.3.D0949.10.17chim.6R.DS.SOSIP.664_N133D_N138T gp120 | A | 487 | Anopheles Darlingi , Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes | MGSLQPLATLYLLGMLVASVLAAENLWVTVYYGVPVWKEAKTTLFCASDARAYEKEVHNVWATHACVPTDPSPQELVLGNVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLICSDATVKTGTVEEMKNCSFNTTTEIRDKEKKEYALFYKPDIVPLSETNNTSEYRLINCNTSACTQACPKVTFEPIPIHYCAPAGYAILKCNDETFNGTGPCSNVSTVQCTHGIRPVVSTQLLLNGSLAEKEIVIRSENLTNNAKIIIVHLHTPVEIVCTRPNNNTRKSVRIGPGQTFYATGDIIGDIKQAHCNISEEKWNDTLQKVGIELQKHFPNKTIKYNQSAGGDMEITTHSFNCGGEFFYCNTSNLFNGTYNGTYISTNSSANSTSTITLQCRIKQIINMWQGVGRCMYAPPIAGNITCRSNITGLLLTRDGGTNSNETETFRPAGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVG |
| CH848.3.D0949.10.17chim.6R.DS.SOSIP.664_N133D_N138T gp120 | I | 487 | Anopheles Darlingi , Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes | MGSLQPLATLYLLGMLVASVLAAENLWVTVYYGVPVWKEAKTTLFCASDARAYEKEVHNVWATHACVPTDPSPQELVLGNVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLICSDATVKTGTVEEMKNCSFNTTTEIRDKEKKEYALFYKPDIVPLSETNNTSEYRLINCNTSACTQACPKVTFEPIPIHYCAPAGYAILKCNDETFNGTGPCSNVSTVQCTHGIRPVVSTQLLLNGSLAEKEIVIRSENLTNNAKIIIVHLHTPVEIVCTRPNNNTRKSVRIGPGQTFYATGDIIGDIKQAHCNISEEKWNDTLQKVGIELQKHFPNKTIKYNQSAGGDMEITTHSFNCGGEFFYCNTSNLFNGTYNGTYISTNSSANSTSTITLQCRIKQIINMWQGVGRCMYAPPIAGNITCRSNITGLLLTRDGGTNSNETETFRPAGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVG |
| Envelope Glycoprotein gp141 | F | 153 | Anopheles Darlingi , Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes | AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
| Envelope Glycoprotein gp141 | B | 153 | Anopheles Darlingi , Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes | AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
| Envelope Glycoprotein gp141 | J | 153 | Anopheles Darlingi , Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes | AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
| MU89 Heavy Chain | G | 126 | Anopheles Darlingi , Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes | QVQLVQSGAEVKKPGASVKVSCKASGYRFTDHYIHWVRQAPGQGPEWMGWINTSSGRSNFAQKFQGRVTMTRDTSISTAYMELNRLKSDDTAVYYCTTGSWISLYYDSSGYPNFDYWGQGTLVTVT |
| MU89 Heavy Chain | C | 126 | Anopheles Darlingi , Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes | QVQLVQSGAEVKKPGASVKVSCKASGYRFTDHYIHWVRQAPGQGPEWMGWINTSSGRSNFAQKFQGRVTMTRDTSISTAYMELNRLKSDDTAVYYCTTGSWISLYYDSSGYPNFDYWGQGTLVTVT |
| MU89 Heavy Chain | K | 126 | Anopheles Darlingi , Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes | QVQLVQSGAEVKKPGASVKVSCKASGYRFTDHYIHWVRQAPGQGPEWMGWINTSSGRSNFAQKFQGRVTMTRDTSISTAYMELNRLKSDDTAVYYCTTGSWISLYYDSSGYPNFDYWGQGTLVTVT |
| MU89 Light Chain | H | 106 | Anopheles Darlingi , Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes | TQPASVSGSPGQPITISCTGTSSDVGNYDLVSWYQQHPGNAPKYMIYEVTKRPAGISNRFSGSKSGNTASLTISGLQAEDAADYYCCSYAGSSTVIFGGGTKVTVL |
| MU89 Light Chain | D | 106 | Anopheles Darlingi , Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes | TQPASVSGSPGQPITISCTGTSSDVGNYDLVSWYQQHPGNAPKYMIYEVTKRPAGISNRFSGSKSGNTASLTISGLQAEDAADYYCCSYAGSSTVIFGGGTKVTVL |
| MU89 Light Chain | L | 106 | Anopheles Darlingi , Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes | TQPASVSGSPGQPITISCTGTSSDVGNYDLVSWYQQHPGNAPKYMIYEVTKRPAGISNRFSGSKSGNTASLTISGLQAEDAADYYCCSYAGSSTVIFGGGTKVTVL |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-07-26 Deposition Author(s): Acharya, P. , Stalls, V.