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FASTA Sequence PDB Format mmCIF Format
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8DNN

Crystal structure of neutralizing antibody 80 in complex with sars-cov-2 receptor binding domain

PDB DOI: 10.2210/pdb8dnn/pdb

Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Organism(s): Salmonella Enterica , Gammaretrovirus

Deposited: 2022-07-11
Deposition Author(s): Ivanochko, D. , Julien, J.P. , Kucharska, I. , Muthuraman, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.12 Å

8dnn
Literature

Crystal structure of neutralizing antibody 80 in complex with sars-cov-2 receptor binding domain

Ivanochko, D. , Julien, J.P. , Kucharska, I. , Muthuraman, K.

Primary Citation of Related Structures: 8DNN


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 A 228 Salmonella Enterica , Gammaretrovirus RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFHHHHH
Spike protein S1 D 228 Salmonella Enterica , Gammaretrovirus RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFHHHHH
80 FAB HEAVY CHAIN B 227 Salmonella Enterica , Gammaretrovirus QVQLVQSGAEVKKPGSSVKVSCKASGGTFNRYAFSWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARSTRELPEVVDWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
80 FAB HEAVY CHAIN E 227 Salmonella Enterica , Gammaretrovirus QVQLVQSGAEVKKPGSSVKVSCKASGGTFNRYAFSWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARSTRELPEVVDWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
80 FAB LIGHT CHAIN C 220 Salmonella Enterica , Gammaretrovirus DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSAPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
80 FAB LIGHT CHAIN F 220 Salmonella Enterica , Gammaretrovirus DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSAPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-07-11
Deposition Author(s): Ivanochko, D. , Julien, J.P. , Kucharska, I. , Muthuraman, K.