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FASTA Sequence PDB Format mmCIF Format
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8DIT

Cryo-em structure of a hops core complex containing vps33, vps16, and vps18

PDB DOI: 10.2210/pdb8dit/pdb

Classification: PROTEIN TRANSPORT
Organism(s): Chaetomium Thermophilum

Deposited: 2022-06-29
Deposition Author(s): Dimaio, F. , Farrell, P.D. , Hughson, F.M. , Jeffrey, P.D. , Port, S.A.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 5.1 Å

Literature

Cryo-em structure of a hops core complex containing vps33, vps16, and vps18

Dimaio, F. , Farrell, P.D. , Hughson, F.M. , Jeffrey, P.D. , Port, S.A.

Primary Citation of Related Structures: 8DIT


Proteins
Molecule Chains Sequence Length Organism Sequence
Vacuolar protein sorting-associated protein 33 A 696 Chaetomium Thermophilum MKHHHHHHHGAAGTSLYKKAGENLYFQGSMAPRAGFDAEQVRDKARKDLLHLLEGVRGKKNLVIEKDLAGPLGVIVKASTLRDYGVDNFFFLENKNTGTSQRNIVFIARGESVRNAHAIAAQIKRIQRESQTSHDFHIFWVPRRTLFSDKVLEEAGVLGDANISELPLYFFPLERDVLSLELNDSFRDLYLAKDPTPVFLLSRALMGIQKKHGLFPRIIGKGENAKRVADLLSRMRQELLAGEEAGESDRAGLSPSTTIESVIIIDREVDFVTPLLTQLTYEGLIDEYFGIQNNQTDVDAVIVGAPAQSAASTSTAVPTNSSQSRKRKIQLDGSDSLYSQLRDANFAIVGSLLNTVARRLKSDYESRHNTKTTAELKEFVKKLPGYQAEQQSLKIHSNIAEEIINYTRTEIFNKLLEVQQNLAAGADPSSQFDSIEELVARDTPLPQVLRLLCLYSCISGGIKTKELDHFRRLVLQGYGHQHLLTLHNLERLQMFLSKSSPLASMITMSGSSGGPDQKTNYTYLRKQLRLIVDEVNEQDPNDIAYVYSGYAPLSIRLVQCVLQKQYLLSITKGSGTVIAAGPVAGGGAQGWKGFEEIVKHARGPTFDEIQKGEDKAVKARALLSGSSGDKKTVFVVFVGGITFTEIAALRFIAKQEEARRNIVICTTSIINGNRMMNAAIETATFEKTTVTTAAAQ
Vacuolar protein sorting-associated protein 16 B 834 Chaetomium Thermophilum MDTAHPTASWEQLGERFYRKIQLYTQVFDQDFDLDNYIVTGAPYGGAIALYRDDEKLVAYQPSRSSRPTIDICSLSGKLLRRISWDQGPIKGVGWSEDEKLLIVMVDGTVRCYFDLQSEFTQFSLGHGAEEHGVKSCRFYSHGLVALLGNNALVSVSSYDEPRPKLLASPPEGRVYSWNIIPPAYSLSRSVEVLLSVNQTIYVCDASECEDRFLDIGPFSHIAVSPNGRFCALYTTTGKVHVITSDFQSRLSEHDTKSKIAPNYFEWCGNDAVVIAWDDEVHLVGPSGSLARFFYDSGRIHLIPDFDGVRILANDRCDFLQKVPDVIEEVFGLGADSPASILLDAVEQLEMKSPKADDNIQLIRPHLVEAVDTCVSAAGQEFSIHWQKQLLKAASFGKSVLDIYNSDDFVDMCETLRVLNAVRFYEVGLPLSYEQYQRLSPSGLISRLLNRHEYLLAIRIADHLRLPTDKIHVHWASAKVRLGSEDDDTICRKIVEKLSGKPGISFEVIARTAYEEGRTRLATELLNHEPRAGRQVPLLLSMEEDELALDKAIESGDTDLIYFVIHQLRRKLPLASFFRVVSSRPTASAMVEALARNSDGDGNEDTALLKDLYYQDDRRLDGASVFIREALQQPETRTASDKLDLAANLLQGNQKEHVFELGALKEAKMLLRMQETFERDLTDSFVGLSVNQTMFKLIKLGYHGRAKKIQSEFKVPERVAWWIRLQALVAKRDWNEIEEISRQRKSPIGWEPFFNQVLQAGNPRLAATFIPKCTNLEPGQTITMYEKCGMRVKAAEEAVRLKDTEAWNRLLEAAGRNTAEGREIERLGATVFKK
Vacuolar protein sorting-associated protein 18 C 968 Chaetomium Thermophilum MALDLSSGFAAADAIANLQLADATLPIFEVLPVQLQFSVAADFVAGQAANNVLVIALSNGRILRIDLNKPEDIDDIDLPKKPSEVGVIRRMFLDPTASHLIICTSLGENYYLHSQSRQPRPLARLRGVVIESIAWSPALPTQSTREILIGAADGNIYEAYIETSTEFYRREDKYLKLVQKLPDGPITGLWADSLPGHKDTRRVLVATSSRLFHWVGKIGRGHDSGGGASIYDKLFEAEQPTVHALSGASAAAMSMLVVSPDAEQPSPRFREDEVPERAFAWLSSHGVYHGKLLLKGPLSELGAKVFAEAKLLPRAQLANPEGASRRQLSTEYVDAVALTQWHIVSLVAGRVVIANRLTGSIIYDQTILNPGQKAVGLCVDQQKSTFWLFTPQEIFEIVPRDEDRDIWKIMLQLQQFDAALQYAHTPAEKDAVAIASGDHLVSKGQFLEAAAVYGKSSKPFEEVALTFIDNEQPDALRKYLLTKLGTYKKSAVMQRVMIATWLIEVFMAKLNSLDDTIITGAELSETLNPNQTKEQLEAVRAEFQDFINKHKGDLDRKTVYDVIGSHGREEELLYYANAINDYNYVLSYWVQRERWTEALKVLKKQTDPEVFYRYSSVLMTHAATELVEILMRQSNLNPRNLIPAMLEYDRNYKGPLAQNQAVRYLLYVVNQLGSTDSAVHNTLVSIYASHPSKDESALLEYLESQGEEPNYDPDFALRLCIQHRRVLSCAHIYTSMGQYGAAVDLALAHDEVELASIIADRPISNPQLRKKLWLKVAKKVISQQSDGIKTAIDFLRRCDLLKIEDLIPFFPDFVVIDDFKEEICAALEDYSRNIDALRREMDEASQTAANIKVDIAALDKRYAIVEPGEKCYACGLPLLSRQFFVFPCQHAFHSDCLARRVLEQAPPAKARRIKECQVQISKGLVNGEKREAMIAELDALIASACDYAIRRINEPFIKDDDDKDEWAL
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-06-29
Deposition Author(s): Dimaio, F. , Farrell, P.D. , Hughson, F.M. , Jeffrey, P.D. , Port, S.A.