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FASTA Sequence PDB Format mmCIF Format
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8DIM

Cryoem structure of influenza a virus a/ohio/09/2015 hemagglutinin bound to cr6261 fab

PDB DOI: 10.2210/pdb8dim/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Salmonella Enterica , Streptomyces Hygroscopicus Subsp. Limoneus

Deposited: 2022-06-29
Deposition Author(s): Seattle Structural Genomics Center For Infectious Disease (Ssgcid)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.62 Å

8dim
Literature

Cryoem structure of influenza a virus a/ohio/09/2015 hemagglutinin bound to cr6261 fab

Seattle Structural Genomics Center For Infectious Disease (Ssgcid)

Primary Citation of Related Structures: 8DIM


Proteins
Molecule Chains Sequence Length Organism Sequence
hemagglutinin A 576 Salmonella Enterica , Streptomyces Hygroscopicus Subsp. Limoneus MVLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAGSDKICIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCKLRGVAPLHLGKCNIAGWLLGNPECESLATASSWSYIVETSSSNNGTCYPGDFINYEELREQLSSVSSFEKFEIFPKTSSWPNHETNKGVTAACPHAGTNSFYKNLIWLVKKENSYPKINISYTNNRGKEVLVLWAIHHPPTSTDQQSLYQNANSYVFVGSSRYSRKFEPEIATRPKVRGQAGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISETPVHDCDTTCQTPNGAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFSHLERRIENLNKKVDDGFIDIWTYNAELLVLLENERTLDYHDSNVKTLYEKVRSQLKNNAKEIGNGCFEFYHKCDDTCMESVKNGTYDYPKYSEEFLVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHH
hemagglutinin D 576 Salmonella Enterica , Streptomyces Hygroscopicus Subsp. Limoneus MVLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAGSDKICIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCKLRGVAPLHLGKCNIAGWLLGNPECESLATASSWSYIVETSSSNNGTCYPGDFINYEELREQLSSVSSFEKFEIFPKTSSWPNHETNKGVTAACPHAGTNSFYKNLIWLVKKENSYPKINISYTNNRGKEVLVLWAIHHPPTSTDQQSLYQNANSYVFVGSSRYSRKFEPEIATRPKVRGQAGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISETPVHDCDTTCQTPNGAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFSHLERRIENLNKKVDDGFIDIWTYNAELLVLLENERTLDYHDSNVKTLYEKVRSQLKNNAKEIGNGCFEFYHKCDDTCMESVKNGTYDYPKYSEEFLVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHH
hemagglutinin G 576 Salmonella Enterica , Streptomyces Hygroscopicus Subsp. Limoneus MVLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAGSDKICIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCKLRGVAPLHLGKCNIAGWLLGNPECESLATASSWSYIVETSSSNNGTCYPGDFINYEELREQLSSVSSFEKFEIFPKTSSWPNHETNKGVTAACPHAGTNSFYKNLIWLVKKENSYPKINISYTNNRGKEVLVLWAIHHPPTSTDQQSLYQNANSYVFVGSSRYSRKFEPEIATRPKVRGQAGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISETPVHDCDTTCQTPNGAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFSHLERRIENLNKKVDDGFIDIWTYNAELLVLLENERTLDYHDSNVKTLYEKVRSQLKNNAKEIGNGCFEFYHKCDDTCMESVKNGTYDYPKYSEEFLVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHH
CR6261 Fab heavy chain B 251 Salmonella Enterica , Streptomyces Hygroscopicus Subsp. Limoneus MEWSWVFLFFLSVTTGVHSEVQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
CR6261 Fab heavy chain E 251 Salmonella Enterica , Streptomyces Hygroscopicus Subsp. Limoneus MEWSWVFLFFLSVTTGVHSEVQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
CR6261 Fab heavy chain H 251 Salmonella Enterica , Streptomyces Hygroscopicus Subsp. Limoneus MEWSWVFLFFLSVTTGVHSEVQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
CR6261 Fab light chain C 240 Salmonella Enterica , Streptomyces Hygroscopicus Subsp. Limoneus MEWSWVFLFFLSVTTGVHSQSVLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVLGAAAGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
CR6261 Fab light chain F 240 Salmonella Enterica , Streptomyces Hygroscopicus Subsp. Limoneus MEWSWVFLFFLSVTTGVHSQSVLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVLGAAAGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
CR6261 Fab light chain I 240 Salmonella Enterica , Streptomyces Hygroscopicus Subsp. Limoneus MEWSWVFLFFLSVTTGVHSQSVLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVLGAAAGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-06-29
Deposition Author(s): Seattle Structural Genomics Center For Infectious Disease (Ssgcid)