PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8DGU

Crystal structure of sars-cov-2 spike stem helix peptide in complex with fab of broadly neutralizing antibody cc25.106 isolated from a vaccinated covid-19 convalescent

PDB DOI: 10.2210/pdb8dgu/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2022-06-24
Deposition Author(s): Liu, H. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.89 Å

Literature

Crystal structure of sars-cov-2 spike stem helix peptide in complex with fab of broadly neutralizing antibody cc25.106 isolated from a vaccinated covid-19 convalescent

Liu, H. , Wilson, I.A.

Primary Citation of Related Structures: 8DGU


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S2' A 25 Homo Sapiens , Synthetic Construct PLQPELDSFKEELDKYFKNHTSPDV
Antibody CC25.106 Fab heavy chain H 220 Homo Sapiens , Synthetic Construct EVQLVQSGAEVKKPGASLKVSCKASGYTFTDYYMHWVRQAPGQGLEWMGIIKPSAGNTRNAQKFQGRVTMTRDTSTSTVYMELSALRFEDTAVYYCARGGVHGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
Antibody CC25.106 Fab light chain L 216 Homo Sapiens , Synthetic Construct QSVLTQPPSVSAPPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIHENNQRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDTNLGAFVFGAATRVTVLGQPKANPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-06-24
Deposition Author(s): Liu, H. , Wilson, I.A.