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FASTA Sequence PDB Format mmCIF Format
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8DCN

Crystal structure of clostridioides difficile binary toxin cdtb d4 fragment in complex with bintoxb/9 fab

PDB DOI: 10.2210/pdb8dcn/pdb

Classification: TOXIN/IMMUNE SYSTEM
Organism(s): Clostridioides Difficile , Mus Musculus

Deposited: 2022-06-16
Deposition Author(s): Goldsmith, J.A. , Mclellan, J.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.6 Å

8dcn
Literature

Crystal structure of clostridioides difficile binary toxin cdtb d4 fragment in complex with bintoxb/9 fab

Goldsmith, J.A. , Mclellan, J.S.

Primary Citation of Related Structures: 8DCN


Proteins
Molecule Chains Sequence Length Organism Sequence
BINTOXB/9 Fab heavy chain A 231 Clostridioides Difficile , Mus Musculus QVQLQQSGAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPSNDYTSYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCARCWGYDPYYFDYWGQGTTLTVSSASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGKGLEVLFQ
BINTOXB/9 Fab heavy chain D 231 Clostridioides Difficile , Mus Musculus QVQLQQSGAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPSNDYTSYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCARCWGYDPYYFDYWGQGTTLTVSSASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGKGLEVLFQ
BINTOXB/9 Fab light chain B 219 Clostridioides Difficile , Mus Musculus DIVMSQSPSLLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKVLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYNLLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
BINTOXB/9 Fab light chain E 219 Clostridioides Difficile , Mus Musculus DIVMSQSPSLLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKVLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYNLLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
ADP-ribosylating binary toxin binding subunit CdtB C 130 Clostridioides Difficile , Mus Musculus MKIPTDQEIMDAHKIYFADLNFNPSTGNTYINGMYFAPTQTNKEALDYIQKYRVEATLQYSGFKDIGTKDKEMRNYLGDPNQPKTNYVNLRSYFTGGENIMTYKKLRIYAITPDDRELLVLSVDHHHHHH
ADP-ribosylating binary toxin binding subunit CdtB F 130 Clostridioides Difficile , Mus Musculus MKIPTDQEIMDAHKIYFADLNFNPSTGNTYINGMYFAPTQTNKEALDYIQKYRVEATLQYSGFKDIGTKDKEMRNYLGDPNQPKTNYVNLRSYFTGGENIMTYKKLRIYAITPDDRELLVLSVDHHHHHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-06-16
Deposition Author(s): Goldsmith, J.A. , Mclellan, J.S.