Crystal structure of clostridioides difficile binary toxin procdtb lacking d4 in complex with bintoxb/22 fab
PDB DOI: 10.2210/pdb8dcm/pdb
Classification: TOXIN/IMMUNE SYSTEM Organism(s): Clostridioides Difficile , Mus Musculus
Deposited: 2022-06-16 Deposition Author(s): Goldsmith, J.A. , Mclellan, J.S.
Crystal structure of clostridioides difficile binary toxin procdtb lacking d4 in complex with bintoxb/22 fab
Goldsmith, J.A. , Mclellan, J.S.
Primary Citation of Related Structures: 8DCM
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
BINTOXB/22 Fab heavy chain | A | 229 | Clostridioides Difficile , Mus Musculus | QIQLVQSGPELKKPGETVKISCKASGYTFTNYGMNWVKQAPGKDLKWMGWMSTYTGEPTYADDFKGRFAFSLETSASTAYLQINNLKNEDMATYFCARRGNYLSFDYWGQGTTLTVSSASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGKGLEVLFQ |
BINTOXB/22 Fab light chain | B | 212 | Clostridioides Difficile , Mus Musculus | DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVGWYQQKPGQSPKLLIYSASYRYTGVPDRFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSPPFTFGSGTELEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATQGTTSIVKSFNRNEC |
ADP-ribosylating binary toxin binding subunit CdtB | C | 711 | Clostridioides Difficile , Mus Musculus | MEIVNEDILPNNGLMGYYFTDEHFKDLKLMAPIKDGNLKFEEKKVDKLLDKDKSDVKSIRWTGRIIPSKDGEYTLSTDRDDVLMQVNTESTISNTLKVNMKKGKEYKVRIELQDKNLGSIDNLSSPNLYWELDGMKKIIPEENLFLRDYSNIEKDDPFIPNNNFFDPKLMSDWEDEDLDTDNDNIPDSYERNGYTIKDLIAVKWEDSFAEQGYKKYVSNYLESNTAGDPYTDYEKASGSFDKAIKTEARDPLVAAYPIVGVGMEKLIISTNEHASTDQGKTVSRATTNSKTESNTAGVSVNVGYQNGFTANVTTNYSHTTDNSTAVQDSNGESWNTGLSINKGESAYINANVRYYNTGTAPMYKVTPTTNLVLDGDTLSTIKAQENQIGNNLSPGDTYPKKGLSPLALNTMDQFSSRLIPINYDQLKKLDAGKQIKLETTQVSGNFGTKNSSGQIVTEGNSWSDYISQIDSISASIILDTENESYERRVTAKNLQDPEDKTPELTIGEAIEKAFGATKKDGLLYFNDIPIDESCVELIFDDNTANKIKDSLKTLSDKKIYNVKLERGMNILIKTPTYFTNFDDYNNYPSTWSNVNTTNQDGLQGSANKLNGETKIKIPMSELKPYKRYVFSGYSKDPLTSNSIIVKIKAKEEKTDYLVPEQGYTKFSYEFETTEKDSSNIEITLIGSGTTYLDNLSITELNSTPEHHHHHH |
Method: X-RAY DIFFRACTION
Deposited Date: 2022-06-16 Deposition Author(s): Goldsmith, J.A. , Mclellan, J.S.