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8D36
Crystal structure of sars-cov-2 fusion peptide in complex with neutralizing antibody cov44-62
PDB DOI: 10.2210/pdb8d36/pdb
Classification: IMMUNE SYSTEM Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2022-05-31 Deposition Author(s): Lee, C.C.D. , Wilson, I.A. , Yuan, M.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.45 Å
Crystal structure of sars-cov-2 fusion peptide in complex with neutralizing antibody cov44-62
Lee, C.C.D. , Wilson, I.A. , Yuan, M.
Primary Citation of Related Structures: 8D36
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Neutralizing antibody COV44-62 heavy chain | H | 227 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | QMQLMQSGAEVKKPGASVTVSCKASGDTFSDYRIHWVRQAPGQGLEWMGRMNPKSGDTNFAQKFQGRVTMTRDMSINTAYMTLSGLTFDDTALYYCASLLIVGGFDPLDDFEVWGQGTMVTISSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC |
| Neutralizing antibody COV44-62 light chain | L | 216 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | QSALTQPPSASGSPGQSVTISCSGTSSDVGGYNFVSWYQHHPGKAPKILIYEVTKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYGGTNNLLFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS |
| Spike protein S2 fusion peptide | F | 15 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | PSKRSFIEDLLFNKV |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2022-05-31 Deposition Author(s): Lee, C.C.D. , Wilson, I.A. , Yuan, M.