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FASTA Sequence PDB Format mmCIF Format
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8CML

Cryo-em structure of complement c5 in complex with nanobodies unbc5-1 and unbc5-2

PDB DOI: 10.2210/pdb8cml/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Lama Glama

Deposited: 2023-02-20
Deposition Author(s): De La O Becerra, K.I. , Gros, P.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

8cml
Literature

Cryo-em structure of complement c5 in complex with nanobodies unbc5-1 and unbc5-2

De La O Becerra, K.I. , Gros, P.

Primary Citation of Related Structures: 8CML


Proteins
Molecule Chains Sequence Length Organism Sequence
Nanobody UNbC5-2 A 150 Homo Sapiens , Lama Glama MEVQLVESGGGLVQPGGSLRLSCAASGRTFSTNTMGWFRQAPGQEREFVALISGNGRILDYSDSAKGRFTISRDNAKNTVYLQMNSLKPEDTGVYFCAAEFRGRTLASYWGQGTQVTVSSAAASGSLEQKLISEEDLNGAAHHHHHHGAA
Complement C5 beta chain E 655 Homo Sapiens , Lama Glama QEQTYVISAPKIFRVGASENIVIQVYGYTEAFDATISIKSYPDKKFSYSSGHVHLSSENKFQNSAILTIQPKQLPGGQNPVSYVYLEVVSKHFSKSKRMPITYDNGFLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKEDFSTTGTAYFEVKEYVLPHFSVSIEPEYNFIGYKNFKNFEITIKARYFYNKVVTEADVYITFGIREDLKDDQKEMMQTAMQNTMLINGIAQVTFDSETAVKELSYYSLEDLNNKYLYIAVTVIESTGGFSEEAEIPGIKYVLSPYKLNLVATPLFLKPGIPYPIKVQVKDSLDQLVGGVPVTLNAQTIDVNQETSDLDPSKSVTRVDDGVASFVLNLPSGVTVLEFNVKTDAPDLPEENQAREGYRAIAYSSLSQSYLYIDWTDNHKALLVGEHLNIIVTPKSPYIDKITHYNYLILSKGKIIHFGTREKFSDASYQSINIPVTQNMVPSSRLLVYYIVTGEQTAELVSDSVWLNIEEKCGNQLQVHLSPDADAYSPGQTVSLNMATGMDSWVALAAVDSAVYGVQRGAKKPLERVFQFLEKSDLGCGAGGGLNNANVFHLAGLTFLTNANADDSQENDEPCKEIL
Complement C5 alpha chain B 999 Homo Sapiens , Lama Glama TLQKKIEEIAAKYKHSVVKKCCYDGACVNNDETCEQRAARISLGPRCIKAFTECCVVASQLRANISHKDMQLGRLHMKTLLPVSKPEIRSYFPESWLWEVHLVPRRKQLQFALPDSLTTWEIQGVGISNTGICVADTVKAKVFKDVFLEMNIPYSVVRGEQIQLKGTVYNYRTSGMQFCVKMSAVEGICTSESPVIDHQGTKSSKCVRQKVEGSSSHLVTFTVLPLEIGLHNINFSLETWFGKEILVKTLRVVPEGVKRESYSGVTLDPRGIYGTISRRKEFPYRIPLDLVPKTEIKRILSVKGLLVGEILSAVLSQEGINILTHLPKGSAEAELMSVVPVFYVFHYLETGNHWNIFHSDPLIEKQKLKKKLKEGMLSIMSYRNADYSYSVWKGGSASTWLTAFALRVLGQVNKYVEQNQNSICNSLLWLVENYQLDNGSFKENSQYQPIKLQGTLPVEARENSLYLTAFTVIGIRKAFDICPLVKIDTALIKADNFLLENTLPAQSTFTLAISAYALSLGDKTHPQFRSIVSALKREALVKGNPPIYRFWKDNLQHKDSSVPNTGTARMVETTAYALLTSLNLKDINYVNPVIKWLSEEQRYGGGFYSTQDTINAIEGLTEYSLLVKQLRLSMDIDVSYKHKGALHNYKMTDKNFLGRPVEVLLNDDLIVSTGFGSGLATVHVTTVVHKTSTSEEVCSFYLKIDTQDIEASHYRGYGNSDYKRIVACASYKPSREESSSGSSHAVMDISLPTGISANEEDLKALVEGVDQLFTDYQIKDGHVILQLNSIPSSDFLCVRFRIFELFEVGFLSPATFTVYEYHRPDKQCTMFYSTSNIKIQKVCEGAACKCVEADCGQMQEELDLTISAETRKQTACKPEIAYAYKVSITSITVENVFVKYKATLLDIYKTGEAVAEKDSEITFIKKVTCTNAELVKGRQYLIMGKEALQIKYNFSFRYIYPLDSLTWIEYWPRDTTCSSCQAFLANLDEFAEDIFLNGC
Nanobody UNbC5-1 C 158 Homo Sapiens , Lama Glama MEVQLVESGGGLVQAGGSLRLSCAASGFTFDDYAIGWFRQAPGKEREGVSCISTSDGSTYYADSVKGRFTISSDNAKNTVYLQMNSLKPEDTAVYYCAADPYLPIRGRGIESTDFGSWGQGTQVTVSSAAASGSLEQKLISEEDLNGAAHHHHHHGAA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-02-20
Deposition Author(s): De La O Becerra, K.I. , Gros, P.