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FASTA Sequence PDB Format mmCIF Format
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8CMF

Human leukocyte antigen class ii allotype dr1 presenting sars-cov-2 nsp3 epitope (orf1ab)1350-1364

PDB DOI: 10.2210/pdb8cmf/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2023-02-19
Deposition Author(s): Godkin, A.J. , Maclachlan, B.J. , Mason, G.H. , Rizkallah, P.J. , Sourfield, D.O.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.2 Å

8cmf
Literature

Human leukocyte antigen class ii allotype dr1 presenting sars-cov-2 nsp3 epitope (orf1ab)1350-1364

Godkin, A.J. , Maclachlan, B.J. , Mason, G.H. , Rizkallah, P.J. , Sourfield, D.O.

Primary Citation of Related Structures: 8CMF


Proteins
Molecule Chains Sequence Length Organism Sequence
HLA class II histocompatibility antigen, DR alpha chain A 183 Homo Sapiens , Synthetic Construct MIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDA
HLA class II histocompatibility antigen, DR alpha chain D 183 Homo Sapiens , Synthetic Construct MIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDA
Human leukocyte antigen DR beta chain allotype DR1 (DRB1*0101) B 194 Homo Sapiens , Synthetic Construct MGSMGDTRPRFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRA
Human leukocyte antigen DR beta chain allotype DR1 (DRB1*0101) E 194 Homo Sapiens , Synthetic Construct MGSMGDTRPRFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRA
SARS-Cov-2 nsp3 epitope (orf1ab)1350-1364 C 15 Homo Sapiens , Synthetic Construct KSAFYILPSIISNEK
SARS-Cov-2 nsp3 epitope (orf1ab)1350-1364 F 15 Homo Sapiens , Synthetic Construct KSAFYILPSIISNEK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-02-19
Deposition Author(s): Godkin, A.J. , Maclachlan, B.J. , Mason, G.H. , Rizkallah, P.J. , Sourfield, D.O.