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FASTA Sequence PDB Format mmCIF Format
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8CBD

Sars-cov-2 delta-rbd complexed with ba.4/5-1 and ey6a fabs

PDB DOI: 10.2210/pdb8cbd/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2023-01-25
Deposition Author(s): Ren, J. , Stuart, D.I. , Zhou, D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.52 Å

Literature

Sars-cov-2 delta-rbd complexed with ba.4/5-1 and ey6a fabs

Ren, J. , Stuart, D.I. , Zhou, D.

Primary Citation of Related Structures: 8CBD


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 R 202 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 HHHHHHTNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGSKPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGKK
Spike protein S1 X 202 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 HHHHHHTNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGSKPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGKK
Spike protein S1 Y 202 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 HHHHHHTNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGSKPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGKK
BA.4/5-1 heavy chain H 222 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLQESGPGLVKPSETLSLTCTVSGGSISSSNYYWGWIRQPPGKGLEWIGSIYYSGSSYYSPSLKSRVTISVDTSKSQFSLKLSSVTAADTAVYYCASTLGATFYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
BA.4/5-1 heavy chain A 222 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLQESGPGLVKPSETLSLTCTVSGGSISSSNYYWGWIRQPPGKGLEWIGSIYYSGSSYYSPSLKSRVTISVDTSKSQFSLKLSSVTAADTAVYYCASTLGATFYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
BA.4/5-1 heavy chain C 222 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLQESGPGLVKPSETLSLTCTVSGGSISSSNYYWGWIRQPPGKGLEWIGSIYYSGSSYYSPSLKSRVTISVDTSKSQFSLKLSSVTAADTAVYYCASTLGATFYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
BA.4/5-1 light chain L 214 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 DIQLTQSPSSLSASVGDKVTITCRASQGISNSLAWYQQNPGKAPKLLLYTASTLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYDTWYTFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
BA.4/5-1 light chain B 214 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 DIQLTQSPSSLSASVGDKVTITCRASQGISNSLAWYQQNPGKAPKLLLYTASTLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYDTWYTFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
BA.4/5-1 light chain D 214 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 DIQLTQSPSSLSASVGDKVTITCRASQGISNSLAWYQQNPGKAPKLLLYTASTLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYDTWYTFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EY6A heavy chain E 226 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EVQLVESGGGVVQPGRSLRLSCAASAFTFSSYDMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDGGKLWVYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
EY6A heavy chain G 226 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EVQLVESGGGVVQPGRSLRLSCAASAFTFSSYDMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDGGKLWVYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
EY6A heavy chain J 226 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EVQLVESGGGVVQPGRSLRLSCAASAFTFSSYDMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDGGKLWVYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
EY6A light chain F 215 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EY6A light chain I 215 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EY6A light chain K 215 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-01-25
Deposition Author(s): Ren, J. , Stuart, D.I. , Zhou, D.