8BYV
Cryo-em structure of a staphylococus aureus 30s-rbfa complex
PDB DOI: 10.2210/pdb8byv/pdb
Classification: RIBOSOME Organism(s): Staphylococcus Aureus Subsp. Aureus Nctc 8325
Deposited: 2022-12-14 Deposition Author(s): Bikmullin, A.G. , Fatkhullin, B. , Guskov, A. , Stetsenko, A. , Yusupov, M.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.89 Å
Cryo-em structure of a staphylococus aureus 30s-rbfa complex
Bikmullin, A.G. , Fatkhullin, B. , Guskov, A. , Stetsenko, A. , Yusupov, M.
Primary Citation of Related Structures: 8BYV
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Ribosome-binding factor A | A | 116 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MSSMRAERVGEQMKKELMDIINNKVKDPRVGFITITDVVLTNDLSQAKVFLTVLGNDKEVENTFKALDKAKGFIKSELGSRMRLRIMPELMYEYDQSIEYGNKIERMIQDLHKQDR |
| 30S ribosomal protein S10 | J | 102 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MAKQKIRIRLKAYDHRVIDQSAEKIVETAKRSGADVSGPIPLPTEKSVYTIIRAVHMYKDSREQFEQRTHKRLIDIVNPTPKTVDALMGLNLPSGVDIEIKL |
| 30S ribosomal protein S11 | K | 129 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFKGSKKSTPFAAQMASETASKSAMEHGLKTVEVTVKGPGPGRESAIRALQSAGLEVTAIRDVTPVPHNGCRPPKRRRV |
| 30S ribosomal protein S12 | L | 137 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MPTINQLVRKPRQSKIKKSDSPALNKGFNSKKKKFTDLNSPQKRGVCTRVGTMTPKKPNSALRKYARVRLSNNIEINAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGALDTSGVDGRRQGRSLYGTKKPKN |
| 30S ribosomal protein S13 | M | 121 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MARIAGVDIPREKRVVISLTYIYGIGTSTAQKILEEANVSADTRVKDLTDDELGRIREVVDGYKVEGDLRRETNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANKKK |
| 30S ribosomal protein S14 type Z | N | 61 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MAKTSMVAKQQKKQKYAVREYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVRKASW |
| 30S ribosomal protein S15 | O | 89 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MAISQERKNEIIKEYRVHETDTGSPEVQIAVLTAEINAVNEHLRTHKKDHHSRRGLLKMVGRRRHLLNYLRSKDIQRYRELIKSLGIRR |
| 30S ribosomal protein S16 | P | 91 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQIGTYNPTSANAPEIKVDEALALKWLNDGAKPTDTVHNILSKEGIMKKFDEQKKAK |
| 30S ribosomal protein S17 | Q | 87 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSKKYKTHDENNSAKLGDIVKIQETRPLSATKRFRLVEIVEESVII |
| 30S ribosomal protein S18 | R | 80 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MAGGPRRGGRRRKKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRSRHMALLPYVKEEQ |
| 30S ribosomal protein S19 | S | 92 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MARSIKKGPFVDEHLMKKVEAQEGSEKKQVIKTWSRRSTIFPNFIGHTFAVYDGRKHVPVYVTEDMVGHKLGEFAPTRTFKGHVADDKKTRR |
| 30S ribosomal protein S2 | B | 255 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNFLKQVSEDGGQVLFVGTKKQAQESVKSEAERAGQFYINQRWLGGLLTNYKTISKRIKRISEIEKMEEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLNIPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAILEGQQGVSNEEVAAEQNIDLDEKEKSEETEATEE |
| 30S ribosomal protein S20 | T | 83 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MANIKSAIKRVKTTEKAEARNISQKSAMRTAVKNAKTAVSNNADNKNELVSLAVKLVDKAAQSNLIHSNKADRIKSQLMTANK |
| 30S ribosomal protein S3 | C | 217 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MGQKINPIGLRVGIIRDWEAKWYAEKDFASLLHEDLKIRKFIDNELKEASVSHVEIERAANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNALTDKKVHINVIEIKKVDLDARLVAENIARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRADIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTSGGGK |
| 30S ribosomal protein S4 | D | 200 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MARFRGSNWKKSRRLGISLSGTGKELEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGHILVDGKRVDIPSYSVKPGQTISVREKSQKLNIIVESVEINNFVPEYLNFDADSLTGTFVRLPERSELPAEINEQLIVEYYSR |
| 30S ribosomal protein S5 | E | 166 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MARREEETKEFEERVVTINRVAKVVKGGRRFRFTALVVVGDKNGRVGFGTGKAQEVPEAIKKAVEAAKKDLVVVPRVEGTTPHTITGRYGSGSVFMKPAAPGTGVIAGGPVRAVLELAGITDILSKSLGSNTPINMVRATIDGLQNLKNAEDVAKLRGKTVEELYN |
| 30S ribosomal protein S6 | F | 98 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MRTYEVMYIVRPNIEEDAKKALVERFNGILATEGAEVLEAKDWGKRRLAYEINDFKDGFYNIVRVKSDNNKATDEFQRLAKISDDIIRYMVIREDEDK |
| 30S ribosomal protein S7 | G | 156 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MPRKGSVPKRDVLPDPIHNSKLVTKLINKIMLDGKRGTAQRILYSAFDLVEQRSGRDALEVFEEAINNIMPVLEVKARRVGGSNYQVPVEVRPERRTTLGLRWLVNYARLRGEKTMEDRLANEILDAANNTGGAVKKREDTHKMAEANKAFAHYRW |
| 30S ribosomal protein S8 | H | 132 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MTMTDPIADMLTRVRNANMVRHEKLELPASNIKKEIAEILKSEGFIKNVEYVEDDKQGVLRLFLKYGQNDERVITGLKRISKPGLRVYAKASEMPKVLNGLGIALVSTSEGVITDKEARKRNVGGEIIAYVW |
| 30S ribosomal protein S9 | I | 132 | Staphylococcus Aureus Subsp. Aureus Nctc 8325 | MTLAQVEYRGTGRRKNSVARVRLVPGEGNITVNNRDVREYLPFESLILDLNQPFDVTETKGNYDVLVNVHGGGFTGQAQAIRHGIARALLEADPEYRGSLKRAGLLTRDPRMKERKKPGLKAARRSPQFSKR |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-12-14 Deposition Author(s): Bikmullin, A.G. , Fatkhullin, B. , Guskov, A. , Stetsenko, A. , Yusupov, M.