8BV0
Binary complex between the nb-arc domain from the tomato immune receptor nrc1 and the spry domain-containing effector ss15 from the potato cyst nematode
PDB DOI: 10.2210/pdb8bv0/pdb
Classification: PROTEIN BINDING Organism(s): Globodera Rostochiensis , Solanum Lycopersicum
Deposited: 2022-12-01 Deposition Author(s): Bozkurt, T.O. , Contreras, M.P. , Derevnina, L. , Duggan, C. , Harant, A. , Kamoun, S. , Lawson, D.M. , Muniyandi, S. , Pai, H. , Stevenson, C.E.M. , Toghani, A. , Tumtas, Y. , Wu, C.H. , Yuen, E.L.H.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 4.5 Å
Binary complex between the nb-arc domain from the tomato immune receptor nrc1 and the spry domain-containing effector ss15 from the potato cyst nematode
Bozkurt, T.O. , Contreras, M.P. , Derevnina, L. , Duggan, C. , Harant, A. , Kamoun, S. , Lawson, D.M. , Muniyandi, S. , Pai, H. , Stevenson, C.E.M. , Toghani, A. , Tumtas, Y. , Wu, C.H. , Yuen, E.L.H.
Primary Citation of Related Structures: 8BV0
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| NRC1 | A | 347 | Globodera Rostochiensis , Solanum Lycopersicum | GPPVVEEDDVVGFDDEAQTVIDRLLEGSGDLEVIPVVGMPGLGKTTLATKIFKHPKIEYEFFTRLWLYVSQSYKTRELYLNIISKFTGNTKHCRDMSEKDLALKVQEILEEGGKYLIVLDDVWSTDAWDRIKIAFPKNDKGNRVLLTTRDHRVARYCNRSPHDLKFLTDEESWILLEKRAFHKAKCLPELETNGKSIARKCKGLPLAIVVIAGALIGKSKTIKEWEQVDQSVGEHFINRDQPNSCDKLVRMSYDVLPYDWKACFLYFGTFPRGYLIPARKLIRLWIAEGFIQYRGDLSPECKAEEYLNELVNRNLVMVMQRTVDGQIKTCRVHDMLYEFCWQEATTE |
| NRC1 | C | 347 | Globodera Rostochiensis , Solanum Lycopersicum | GPPVVEEDDVVGFDDEAQTVIDRLLEGSGDLEVIPVVGMPGLGKTTLATKIFKHPKIEYEFFTRLWLYVSQSYKTRELYLNIISKFTGNTKHCRDMSEKDLALKVQEILEEGGKYLIVLDDVWSTDAWDRIKIAFPKNDKGNRVLLTTRDHRVARYCNRSPHDLKFLTDEESWILLEKRAFHKAKCLPELETNGKSIARKCKGLPLAIVVIAGALIGKSKTIKEWEQVDQSVGEHFINRDQPNSCDKLVRMSYDVLPYDWKACFLYFGTFPRGYLIPARKLIRLWIAEGFIQYRGDLSPECKAEEYLNELVNRNLVMVMQRTVDGQIKTCRVHDMLYEFCWQEATTE |
| Truncated secreted SPRY domain-containing protein 15 (Fragment) | B | 224 | Globodera Rostochiensis , Solanum Lycopersicum | GPSPKANAKLEKVPSGNAESTPVLTLQNRWAYSARDEKLAWDSAARDEKLELTEPAGLIVQFIGENSKHRSVRAKLPIPKGNSGIFYYEVTISGDGDAIYIGLATEQMPLRDTHVGYNEGTYGYGSSGKFWGHEVGGCSHWGNERPYIDGQPKFDRNNIIGCGVNLKTRQIIYTHNGRPLETTGLLVAESAAELYPCVSLFTSGNEIEANFGTKPFKFNIAEGI |
| Truncated secreted SPRY domain-containing protein 15 (Fragment) | D | 224 | Globodera Rostochiensis , Solanum Lycopersicum | GPSPKANAKLEKVPSGNAESTPVLTLQNRWAYSARDEKLAWDSAARDEKLELTEPAGLIVQFIGENSKHRSVRAKLPIPKGNSGIFYYEVTISGDGDAIYIGLATEQMPLRDTHVGYNEGTYGYGSSGKFWGHEVGGCSHWGNERPYIDGQPKFDRNNIIGCGVNLKTRQIIYTHNGRPLETTGLLVAESAAELYPCVSLFTSGNEIEANFGTKPFKFNIAEGI |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2022-12-01 Deposition Author(s): Bozkurt, T.O. , Contreras, M.P. , Derevnina, L. , Duggan, C. , Harant, A. , Kamoun, S. , Lawson, D.M. , Muniyandi, S. , Pai, H. , Stevenson, C.E.M. , Toghani, A. , Tumtas, Y. , Wu, C.H. , Yuen, E.L.H.