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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8BMW

Ssocsm

PDB DOI: 10.2210/pdb8bmw/pdb

Classification: RNA BINDING PROTEIN
Organism(s): Saccharolobus Solfataricus

Deposited: 2022-11-11
Deposition Author(s): Spagnolo, L. , White, M.F.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.5 Å

8bmw
Literature

Ssocsm

Spagnolo, L. , White, M.F.

Primary Citation of Related Structures: 8BMW


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated small subunit protein (Type III-D) A 139 Saccharolobus Solfataricus MRVKHYIQREFNYSVSSQDLLDIATRIAISAIKPKPKSNKPEPYVDSSTINSLLSFLQSRRNVNELLLYIMRQAGRDEIDEETGKLLLASLKDRELKDAVNLLGYVKWVYDTLTGLKVNYNNVKGVKTFKELVNILSKV
CRISPR-associated small subunit protein (Type III-D) B 139 Saccharolobus Solfataricus MRVKHYIQREFNYSVSSQDLLDIATRIAISAIKPKPKSNKPEPYVDSSTINSLLSFLQSRRNVNELLLYIMRQAGRDEIDEETGKLLLASLKDRELKDAVNLLGYVKWVYDTLTGLKVNYNNVKGVKTFKELVNILSKV
CRISPR-associated small subunit protein (Type III-D) C 139 Saccharolobus Solfataricus MRVKHYIQREFNYSVSSQDLLDIATRIAISAIKPKPKSNKPEPYVDSSTINSLLSFLQSRRNVNELLLYIMRQAGRDEIDEETGKLLLASLKDRELKDAVNLLGYVKWVYDTLTGLKVNYNNVKGVKTFKELVNILSKV
CRISPR-associated small subunit protein (Type III-D) D 139 Saccharolobus Solfataricus MRVKHYIQREFNYSVSSQDLLDIATRIAISAIKPKPKSNKPEPYVDSSTINSLLSFLQSRRNVNELLLYIMRQAGRDEIDEETGKLLLASLKDRELKDAVNLLGYVKWVYDTLTGLKVNYNNVKGVKTFKELVNILSKV
CRISPR-associated small subunit protein (Type III-D) E 139 Saccharolobus Solfataricus MRVKHYIQREFNYSVSSQDLLDIATRIAISAIKPKPKSNKPEPYVDSSTINSLLSFLQSRRNVNELLLYIMRQAGRDEIDEETGKLLLASLKDRELKDAVNLLGYVKWVYDTLTGLKVNYNNVKGVKTFKELVNILSKV
CRISPR-associated Cas7 paralog (Type III-D) J 272 Saccharolobus Solfataricus RSPIRRSNYTPRNEKGLEGVIELQLNVVSDYLHVGSGKYDVEVMRSVSDVKRLVEDYLSGGNKRIPNNVDQYFSMVAFLMVRNKDNVVIPGSTIKGMVRSRLELSVPGSCYIVTGHSTSSSAVYKRIFNPDPNRGSDRFDVNKFPQVCPVCDLLGNMGLASRVSLSDFVMTSGKVDYVNVKGRDYEVVTKGSIFAGKVLYKSLKPVEIGMLLYGFGFVKDCNGSKVMLLGRFKFSDKRFGRVKFSLKTPIADCNKLVSDFVKQFNPRYINEE
CRISPR-associated Cas7 paralog (Type III-D) L 202 Saccharolobus Solfataricus MIPIKVSMRNLSSLTIAGGSTISSIDIPLNPLGVPPSTIKGTMRTAVHNLLPNGYTSCGEVEPESIREAHKNGVCDVCKLFGYPDSLTGCFTIDVSKTDYRTSYITRVSIDDKTQRAKEGSLFTQQIILPNSDISFTVYYNCNDERLFKLLLYSILDLRYWRLGRNTMIDVKVNNVEEICKSVKCDEEINGILNQLSRYLWE
CRISPR-associated Cas7 paralog (Type III-D) N 252 Saccharolobus Solfataricus MVIQVFRLNFRLRTGFRVGGGQEVGDNVIRQLRIGVEGVMIPASSWKGMFRRVSEIVLNSEDHFEEHSKKEVDTRTINALLKSDEKFRRIAISKVGKEVITQNGINVDKLDSESLSDLRRIYNEYNCPIERLYGSNYFAGGITISDSVIPNASIMERTHVTIERKSKKASEKHLFSEEIIDAEKIEVKVIVRNEFELWKNSLKLLREIGYFIGGSKSRGIGYIVLDEKESEYAVINNFSETPKFSELKRYLS
CRISPR-associated Cas7 paralog (Type III-D) G 248 Saccharolobus Solfataricus MSCMDLDVITTVVKIEGKLRNETLLRVGKGKTQDFAEATDNPIIKYRDRPLIPGSSLKGAFRSLVESYTKSLNDSKYYVCDLDDNSCVSCEEKKKDNGIVEGRYCIPCILFGFKDLASRVYILDAIAEKYSISQRTMVAINRVFGGQMPGHLYTLDYVDPGSEFSFMMMIYNLNLIEGEKDWKAKSVEALKFLLATLVREGIFVGARKSVGYGLIKLVDAKVSLYKAPDHLVSPVIVKKLEEVIGTNG
CRISPR-associated Cas7 paralog (Type III-D) F 248 Saccharolobus Solfataricus MSCMDLDVITTVVKIEGKLRNETLLRVGKGKTQDFAEATDNPIIKYRDRPLIPGSSLKGAFRSLVESYTKSLNDSKYYVCDLDDNSCVSCEEKKKDNGIVEGRYCIPCILFGFKDLASRVYILDAIAEKYSISQRTMVAINRVFGGQMPGHLYTLDYVDPGSEFSFMMMIYNLNLIEGEKDWKAKSVEALKFLLATLVREGIFVGARKSVGYGLIKLVDAKVSLYKAPDHLVSPVIVKKLEEVIGTNG
CRISPR-associated Cas7 paralog (Type III-D) H 278 Saccharolobus Solfataricus MVNYTFIDKRVIKRTTMIEGDVETVSPLKIGGGKDNFDPSSLAKDSILKDVEGRPIIPGSSWKGIFRSTGERILRLRNIEVCSGIGKDYCLNNNRKERDFNSALKENVDQALEIFWDYTCLNCKVFGTMSVIGAVRFLDSLPISYSLNTRSMIAISRTEGAVARRALVTVEYVDVGSKFSFKMMGYNLPNYAIGYLITIMKNIHDGFTQVGGHKSRGFGFVKFGKVKFTDLGEKRIGDEDIQVKDVGDLVEGNGDEFFGRMKPFMEAFNNAKIPYPKK
CRISPR-associated Cas7 paralog (Type III-D) I 278 Saccharolobus Solfataricus MVNYTFIDKRVIKRTTMIEGDVETVSPLKIGGGKDNFDPSSLAKDSILKDVEGRPIIPGSSWKGIFRSTGERILRLRNIEVCSGIGKDYCLNNNRKERDFNSALKENVDQALEIFWDYTCLNCKVFGTMSVIGAVRFLDSLPISYSLNTRSMIAISRTEGAVARRALVTVEYVDVGSKFSFKMMGYNLPNYAIGYLITIMKNIHDGFTQVGGHKSRGFGFVKFGKVKFTDLGEKRIGDEDIQVKDVGDLVEGNGDEFFGRMKPFMEAFNNAKIPYPKK
CRISPR-associated protein Cas10 (Type III-D) K 829 Saccharolobus Solfataricus MIRGKLLLPEKKVVFINESEVQSLRKDVVDALKVFSSLACELADNNETKATNIFADLISMIYKLPMLISYVPSDKLSTPHEYFFAYIVFRHLVEDSMPSNDIAKLLEILEEKKRDEIKEVLDYARTLRKIYEKLLYVPADTRPGYNFTSLASHLQLSSILVWLLQKGSVDLNYLRISALLHDIGKLFNPTNHVSESIKILDEVIEGSECLKTNLSRVKSLVEQHHAPLETILNDADRLAASTDRFSEIVKGALNNTKIGECYSLCYGRDVRTKECMECLEEYGEETYSEESKRLYDVISNSVVSQKVEGNAIGYLVYIDFPGIQRFITSFPKLREMSFASFLVDFVTSIYSFIVLDQAYYERTGKKSRIPAEALLSGYGGHSYIIVRSDFGSKDEVKAWLESVSSSALSKLGIRLDVKVADFAYENYVRNYKEVYEDMMSKSYERYLIRDEGKVYSYGLHRVCDNCGIRPAVNRSDDGEYLCETCNLVRDLSKNRGFIAKYKSKYTLYEEQRIEISPKEDIKFKLDKNQDPTSYAMEIIAGYRTTSDSRYIALIKADGNNAGKIFGNTVTFSEYVDKSFRLDFGVKKMFYDTLLDIMRASSDESIKKDLVSRILLGVLYLGGDDIMLLSPSAIAVPFAVKMFKRSLEYTGFTFKVGIISVKPDHPVQFAYGAVNALMEESKIHTGEKSSIGVLVFSSTLASEGVVKSDLKNYRKEKESFLVVSNDVDDVERLLNLMELDDFGKLMELYWNPEEGRKVIRDKIRSLERFVNYADTHDFYNTLAYLIRSKAKSEENSLIKRIIDLTIKGRDDFVFPLYDYYFILKSIRVGI
CRISPR-associated protein Cas5 (Type III-D) M 300 Saccharolobus Solfataricus MILIKLKVKGYITTQMRRIRNYYFSITNYIPSTTLRGAILAEYYNQTGKIDENFYVSPAYPIKTAPAHYFSPAKERKGDEFIEVKRILEKKEKEFEANKPIEEIMKLEIDGKHPKPKIGSLITYEGETDKENKYREFSSKSIIQMHVAIDKTSISSYKGMLFAYEYKEFDEMWAIASDSEVIDTVKRIKIGRGKNRGNKVVDVEKVREVSLDQSKGLLYCLSPCIGSLFGKTFFKAKYIIGDKSIYSGWFTVDSFSGQKPVFETLREGSLVYVESFSNEKSLMPAGLNFMLRISDLSSIL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (48-MER) r 48 NA AUUGAAAGUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-11-11
Deposition Author(s): Spagnolo, L. , White, M.F.