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8BH5

Sars-cov-2 ba.2.12.1 rbd in complex with beta-27 fab and c1 nanobody

PDB DOI: 10.2210/pdb8bh5/pdb

Classification: IMMUNE SYSTEM
Organism(s): Salmonella Enterica , Klebsiella Phage Phiko2 , Gammaretrovirus

Deposited: 2022-10-29
Deposition Author(s): Huo, J. , Ren, J. , Stuart, D.I. , Zhou, D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.38 Å

8bh5
Literature

Sars-cov-2 ba.2.12.1 rbd in complex with beta-27 fab and c1 nanobody

Huo, J. , Ren, J. , Stuart, D.I. , Zhou, D.

Primary Citation of Related Structures: 8BH5


Proteins
Molecule Chains Sequence Length Organism Sequence
Beta-27 heavy chain H 222 Salmonella Enterica , Klebsiella Phage Phiko2 , Gammaretrovirus EVQLLESGGGLVQPGGSLRLSCAASGLTVRSNYMNWVRQAPGKGLEWVSLIYSGGSTFYADSVKGRFTISRHDSKNTLYLQMNSLRAEDTAVYYCARDLVVYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
Beta-27 light chain L 214 Salmonella Enterica , Klebsiella Phage Phiko2 , Gammaretrovirus DIQMTQSPGTLSLSPGERATLSCRASQSVSSSSLAWYQQKHGQAPRLLIYGTSSRATGIPDRFSGSGSGTDFTLTISGLEPEDFAVYYCQQYGSSPLFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Spike protein S1 E 202 Salmonella Enterica , Klebsiella Phage Phiko2 , Gammaretrovirus HHHHHHTNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYQYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGKK
Nanobody C1 C 131 Salmonella Enterica , Klebsiella Phage Phiko2 , Gammaretrovirus QVQLVESGGGLVQPGGSLRLSCAASGFTNDFYSIAWFRQAPGKEREGVSWLSVSDNTPTYVDSVKDRFTISRHNANNTVYLQMNMLKPEDTAIYYCAAGRFAGRDTWPSSYDYWGQGTQVTVSSKHHHHHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-10-29
Deposition Author(s): Huo, J. , Ren, J. , Stuart, D.I. , Zhou, D.