8BG1
Crystal structure of the sars-cov-2 s rbd in complex with pt1511 scfv
PDB DOI: 10.2210/pdb8bg1/pdb
Classification: PROTEIN BINDING Organism(s): Homo Sapiens
Deposited: 2022-10-27 Deposition Author(s): Hansen, G. , Krey, T. , Ssebyatika, G.L.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.88 Å
Crystal structure of the sars-cov-2 s rbd in complex with pt1511 scfv
Hansen, G. , Krey, T. , Ssebyatika, G.L.
Primary Citation of Related Structures: 8BG1
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| pT1511 Fab heavy chain | A | 237 | Homo Sapiens | EVQLVESGGALVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGIDWNSGSIGYADSVKGRFTISRDNAKNSLYLQVNSLRAEDTALYYCVKDSRAHYDILATYVGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTDDDDK |
| pT1511 Fab heavy chain | D | 237 | Homo Sapiens | EVQLVESGGALVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGIDWNSGSIGYADSVKGRFTISRDNAKNSLYLQVNSLRAEDTALYYCVKDSRAHYDILATYVGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTDDDDK |
| pT1511 Fab heavy chain | G | 237 | Homo Sapiens | EVQLVESGGALVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGIDWNSGSIGYADSVKGRFTISRDNAKNSLYLQVNSLRAEDTALYYCVKDSRAHYDILATYVGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTDDDDK |
| pT1511 Fab heavy chain | J | 237 | Homo Sapiens | EVQLVESGGALVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGIDWNSGSIGYADSVKGRFTISRDNAKNSLYLQVNSLRAEDTALYYCVKDSRAHYDILATYVGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTDDDDK |
| pT1511 Fab light chain | B | 218 | Homo Sapiens | DIVMTQFPLSLPVTPGEPASISCRSSQSLLHSNGNNYLDWYLQKPGQSPQLLIYLNSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| pT1511 Fab light chain | E | 218 | Homo Sapiens | DIVMTQFPLSLPVTPGEPASISCRSSQSLLHSNGNNYLDWYLQKPGQSPQLLIYLNSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| pT1511 Fab light chain | H | 218 | Homo Sapiens | DIVMTQFPLSLPVTPGEPASISCRSSQSLLHSNGNNYLDWYLQKPGQSPQLLIYLNSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| pT1511 Fab light chain | K | 218 | Homo Sapiens | DIVMTQFPLSLPVTPGEPASISCRSSQSLLHSNGNNYLDWYLQKPGQSPQLLIYLNSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| Spike protein S1 | C | 199 | Homo Sapiens | NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPDDDDK |
| Spike protein S1 | F | 199 | Homo Sapiens | NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPDDDDK |
| Spike protein S1 | I | 199 | Homo Sapiens | NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPDDDDK |
| Spike protein S1 | L | 199 | Homo Sapiens | NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPDDDDK |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2022-10-27 Deposition Author(s): Hansen, G. , Krey, T. , Ssebyatika, G.L.