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8BE1

Sars-cov-2 rbd in complex with a fab fragment of a neutralising antibody mrbd2

PDB DOI: 10.2210/pdb8be1/pdb

Classification: IMMUNE SYSTEM
Organism(s): Mus Musculus , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2022-10-21
Deposition Author(s): Brear, P. , Fischer, K. , Hollfelder, F. , Hyvonen, M. , Lulla, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.98 Å

Literature

Sars-cov-2 rbd in complex with a fab fragment of a neutralising antibody mrbd2

Brear, P. , Fischer, K. , Hollfelder, F. , Hyvonen, M. , Lulla, A.

Primary Citation of Related Structures: 8BE1


Proteins
Molecule Chains Sequence Length Organism Sequence
Antibody heavy chain A 230 Mus Musculus , Severe Acute Respiratory Syndrome Coronavirus 2 MQVQLQQSGAELARPGASVKLSCKASGYTFISNGISWVKQRTGQGLEWIGEIYPRNGNTYYNEKFKGKATLTADKSSSTAYMELRSLTSEDSAVFFCARDYYYGSFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPRDCGSSHHHHHH
Antibody heavy chain D 230 Mus Musculus , Severe Acute Respiratory Syndrome Coronavirus 2 MQVQLQQSGAELARPGASVKLSCKASGYTFISNGISWVKQRTGQGLEWIGEIYPRNGNTYYNEKFKGKATLTADKSSSTAYMELRSLTSEDSAVFFCARDYYYGSFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPRDCGSSHHHHHH
Antibody light chain B 215 Mus Musculus , Severe Acute Respiratory Syndrome Coronavirus 2 MDIQMTQSPSSLSASLGERVSLTCRASREISGYLTWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
Antibody light chain E 215 Mus Musculus , Severe Acute Respiratory Syndrome Coronavirus 2 MDIQMTQSPSSLSASLGERVSLTCRASREISGYLTWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
Spike protein S1 C 198 Mus Musculus , Severe Acute Respiratory Syndrome Coronavirus 2 GSGTNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP
Spike protein S1 F 198 Mus Musculus , Severe Acute Respiratory Syndrome Coronavirus 2 GSGTNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-10-21
Deposition Author(s): Brear, P. , Fischer, K. , Hollfelder, F. , Hyvonen, M. , Lulla, A.