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8AXB

Cryo-em structure of cas12k-sgrna binary complex (type v-k crispr-associated transposon)

PDB DOI: 10.2210/pdb8axb/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Scytonema Hofmannii

Deposited: 2022-08-31
Deposition Author(s): Lopez-Mendez, B. , Molina, R. , Montoya, G. , Pape, T. , Sofos, N. , Stella, S. , Stutzke, L.S. , Temperini, P. , Tenjo-Castano, F.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.87 Å

8axb
Literature

Cryo-em structure of cas12k-sgrna binary complex (type v-k crispr-associated transposon)

Lopez-Mendez, B. , Molina, R. , Montoya, G. , Pape, T. , Sofos, N. , Stella, S. , Stutzke, L.S. , Temperini, P. , Tenjo-Castano, F.

Primary Citation of Related Structures: 8AXB


Proteins
Molecule Chains Sequence Length Organism Sequence
Cas12k A 651 Scytonema Hofmannii MSQITIQARLISFESNRQQLWKLMADLNTPLINELLCQLGQHPDFEKWQQKGKLPSTVVSQLCQPLKTDPRFAGQPSRLYMSAIHIVDYIYKSWLAIQKRLQQQLDGKTRWLEMLNSDAELVELSGDTLEAIRVKAAEILAIAMPASESDSASPKGKKGKKEKKPSSSSPKRSLSKTLFDAYQETEDIKSRSAISYLLKNGCKLTDKEEDSEKFAKRRRQVEIQIQRLTEKLISRMPKGRDLTNAKWLETLLTATTTVAEDNAQAKRWQDILLTRSSSLPFPLVFETNEDMVWSKNQKGRLCVHFNGLSDLIFEVYCGNRQLHWFQRFLEDQQTKRKSKNQHSSGLFTLRNGHLVWLEGEGKGEPWNLHHLTLYCCVDNRLWTEEGTEIVRQEKADEITKFITNMKKKSDLSDTQQALIQRKQSTLTRINNSFERPSQPLYQGQSHILVGVSLGLEKPATVAVVDAIANKVLAYRSIKQLLGDNYELLNRQRRQQQYLSHERHKAQKNFSPNQFGASELGQHIDRLLAKAIVALARTYKAGSIVLPKLGDMREVVQSEIQAIAEQKFPGYIEGQQKYAKQYRVNVHRWSYGRLIQSIQSKAAQTGIVIEEGKQPIRGSPHDKAKELALSAYNLRLTRRSGSEFELENLYFQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
sgRNA b 261 NA GGAUAUUAAUAGCGCCGCAAUUCAUGCUGCUUGCAGCCUCUGAAUUUUGUUAAAUGAGGGUUAGUUUGACUGUAUAAAUACAGUCUUGCUUUCUGACCCUGGUAGCUGCUCACCCUGAUGCUGCUGUCAAUAGACAGGAUAGGUGCGCUCCCAGCAAUAAGGGCGCGGAUGUACUGCUGUAGUGGCUACUGAAUCACCCCCGAUCAAGGGGGAACCCUCCAAAAGGUGGGUUGAAAGGAGAAGUCAUUUAAUAAGGCCACU
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-08-31
Deposition Author(s): Lopez-Mendez, B. , Molina, R. , Montoya, G. , Pape, T. , Sofos, N. , Stella, S. , Stutzke, L.S. , Temperini, P. , Tenjo-Castano, F.