PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8AI4

Crystal structure of radical sam epimerase epee c223a mutant from bacillus subtilis with [4fe-4s] clusters, s-adenosyl-l-homocysteine and ripp peptide 5 bound

PDB DOI: 10.2210/pdb8ai4/pdb

Classification: METAL BINDING PROTEIN
Organism(s): Tomato Spotted Wilt Virus (Strain Bulgarian L3) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2022-07-25
Deposition Author(s): Benjdia, A. , Berteau, O. , Chavas, L.M.G. , Fyfe, C.D. , Kubiak, X. , Legrand, P. , Polsinelli, I.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.75 Å

8ai4
Literature

Crystal structure of radical sam epimerase epee c223a mutant from bacillus subtilis with [4fe-4s] clusters, s-adenosyl-l-homocysteine and ripp peptide 5 bound

Benjdia, A. , Berteau, O. , Chavas, L.M.G. , Fyfe, C.D. , Kubiak, X. , Legrand, P. , Polsinelli, I.

Primary Citation of Related Structures: 8AI4


Proteins
Molecule Chains Sequence Length Organism Sequence
Radical SAM core domain-containing protein A 344 Tomato Spotted Wilt Virus (Strain Bulgarian L3) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MASWSHPQFEKSGGGGGENLYFQGHMYNKTVSINLDSRCNASCDHCCFSSSPTSTTRMEKEYIRELVTEFAKNKTIQVISFTGGEVFLDYKFLKELMEIIKPYEKQITLISNGFWGLSKKKVQEYFHDMNSLNVIALTISYDEYHAPFVKSSSIKNILEHSRKYPDIDISLNMAVTKDKMSNHILEELGDSILGVKITKFPMISVGAAKTRIKQENIHKFYSLEDEDSLHCPGYDIVYHHDGEIYPCASPAIFETKITLREEYNQSFERTVEKLNSNLLLFILRKEGFKWFLNILKENNKIEEFDIPYEFSSICGVCGSLFNSAEKINYFYPYMEKYYNENFKV
Radical SAM core domain-containing protein B 344 Tomato Spotted Wilt Virus (Strain Bulgarian L3) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MASWSHPQFEKSGGGGGENLYFQGHMYNKTVSINLDSRCNASCDHCCFSSSPTSTTRMEKEYIRELVTEFAKNKTIQVISFTGGEVFLDYKFLKELMEIIKPYEKQITLISNGFWGLSKKKVQEYFHDMNSLNVIALTISYDEYHAPFVKSSSIKNILEHSRKYPDIDISLNMAVTKDKMSNHILEELGDSILGVKITKFPMISVGAAKTRIKQENIHKFYSLEDEDSLHCPGYDIVYHHDGEIYPCASPAIFETKITLREEYNQSFERTVEKLNSNLLLFILRKEGFKWFLNILKENNKIEEFDIPYEFSSICGVCGSLFNSAEKINYFYPYMEKYYNENFKV
Putative exported peptide YydF C 11 Tomato Spotted Wilt Virus (Strain Bulgarian L3) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) FVKSKENRWIL
Putative exported peptide YydF D 11 Tomato Spotted Wilt Virus (Strain Bulgarian L3) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) FVKSKENRWIL
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-07-25
Deposition Author(s): Benjdia, A. , Berteau, O. , Chavas, L.M.G. , Fyfe, C.D. , Kubiak, X. , Legrand, P. , Polsinelli, I.