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FASTA Sequence PDB Format mmCIF Format
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8AA2

Inactive levan utilisation machinery (utilisome) in the presence of levan fructo-oligosaccharides dp 15-25

PDB DOI: 10.2210/pdb8aa2/pdb

Classification: TRANSPORT PROTEIN
Organism(s): Bacteroides Thetaiotaomicron Vpi-5482

Deposited: 2022-06-29
Deposition Author(s): Ranson, N.A. , Silale, A. , Van Den Berg, B. , White, J.B.R.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

8aa2
Literature

Inactive levan utilisation machinery (utilisome) in the presence of levan fructo-oligosaccharides dp 15-25

Ranson, N.A. , Silale, A. , Van Den Berg, B. , White, J.B.R.

Primary Citation of Related Structures: 8AA2


Proteins
Molecule Chains Sequence Length Organism Sequence
Glycoside hydrolase family 32 E 523 Bacteroides Thetaiotaomicron Vpi-5482 MMKNMILPIAFTALIASMTACSDETDPILTQKNWDGTATYFQSSDEHGFSMYYKPQVGFVGAPMPFYDPVAKDFKVMYLQDYRPNPEATYHPIFGVATKDGATYESLGELISCGGRDEQDAAIGTGGTIYNPADKLYYTFYTGNKFKPSSDQNAQVVMVATSPDFKTWTKNRTFYLKGDTYGYDKNDFRDPFLFQTEDGVYHMLIATRKNGKGHIAEFTSADLKEWESAGTFMTMMWDRFYECPDVFKMGDWWYLIYSEQASFMRKVQYFKGRTLEDLKATTANDAGIWPDNREGMLDSRAFYAGKTASDGTNRYIWGWCPTRAGNDNGNVGDVEPEWAGNLVAQRLIQHEDGTLTLGVPDAIDRKYTSAQEVKVMAKDGNMIESGKTYTLGEGASVIFNRLKVHNKISFTVKTASNTDRFGISFVRGTDSASWYSIHVNADEGKANFEKDGDDAKYLFDNKFNIPADNEYRVTIYSDQSVCVTYINDQLSFTNRIYQMQKNPWSLCCYKGEITVSDVQVSTY
Glycoside hydrolase family 32 M 523 Bacteroides Thetaiotaomicron Vpi-5482 MMKNMILPIAFTALIASMTACSDETDPILTQKNWDGTATYFQSSDEHGFSMYYKPQVGFVGAPMPFYDPVAKDFKVMYLQDYRPNPEATYHPIFGVATKDGATYESLGELISCGGRDEQDAAIGTGGTIYNPADKLYYTFYTGNKFKPSSDQNAQVVMVATSPDFKTWTKNRTFYLKGDTYGYDKNDFRDPFLFQTEDGVYHMLIATRKNGKGHIAEFTSADLKEWESAGTFMTMMWDRFYECPDVFKMGDWWYLIYSEQASFMRKVQYFKGRTLEDLKATTANDAGIWPDNREGMLDSRAFYAGKTASDGTNRYIWGWCPTRAGNDNGNVGDVEPEWAGNLVAQRLIQHEDGTLTLGVPDAIDRKYTSAQEVKVMAKDGNMIESGKTYTLGEGASVIFNRLKVHNKISFTVKTASNTDRFGISFVRGTDSASWYSIHVNADEGKANFEKDGDDAKYLFDNKFNIPADNEYRVTIYSDQSVCVTYINDQLSFTNRIYQMQKNPWSLCCYKGEITVSDVQVSTY
DUF4960 domain-containing protein T 467 Bacteroides Thetaiotaomicron Vpi-5482 MKSIIKQLYTILLVTVACLTVTGCSDDFKSGLRLDGDVWVNSIRLDEYAGTVDYQNKAIVVGVPYDYDITRMVVTEMNLSEGAKASIAIGETIDFSLPVSLTVKNGDVQMSYTITVKRDEAKILTFKLNDTYVGKVDQLSKTISVVVPLTVDITQLKGTFTVTDGATVTPASGSIQDFTNPVTYTATYRSAVTPYVVTVTQGNVIPTAFVGTASSVSLLTSPEEKAAAQWMMDNVSMSEYISFKDVVDGKVDLGKYTAIWWHFHADNGDNPPLPDDAKAAAEKFKVYYQNGGNLLLTRYATFYIANLGIAKDERVPNNSWGGNEDSPEITSAPWSFLITGSESHPLFQDLRWKDGDKSTVYTCDAGYAITNSTAQWHIGTDWGGYDDLNAWRNLTGGIDLAHGGDGAVVIAEFEPRSNSGRTLCIGSGCYDWYGKGVDASADYYHYNVEQMTLNAINYLCKHHHHHH
DUF4960 domain-containing protein G 467 Bacteroides Thetaiotaomicron Vpi-5482 MKSIIKQLYTILLVTVACLTVTGCSDDFKSGLRLDGDVWVNSIRLDEYAGTVDYQNKAIVVGVPYDYDITRMVVTEMNLSEGAKASIAIGETIDFSLPVSLTVKNGDVQMSYTITVKRDEAKILTFKLNDTYVGKVDQLSKTISVVVPLTVDITQLKGTFTVTDGATVTPASGSIQDFTNPVTYTATYRSAVTPYVVTVTQGNVIPTAFVGTASSVSLLTSPEEKAAAQWMMDNVSMSEYISFKDVVDGKVDLGKYTAIWWHFHADNGDNPPLPDDAKAAAEKFKVYYQNGGNLLLTRYATFYIANLGIAKDERVPNNSWGGNEDSPEITSAPWSFLITGSESHPLFQDLRWKDGDKSTVYTCDAGYAITNSTAQWHIGTDWGGYDDLNAWRNLTGGIDLAHGGDGAVVIAEFEPRSNSGRTLCIGSGCYDWYGKGVDASADYYHYNVEQMTLNAINYLCKHHHHHH
SusD homolog B 570 Bacteroides Thetaiotaomicron Vpi-5482 MKKIIYIATIGITLLTTSCDDFLDRQVPQGIVTGDQIASPEYVDNLVISAYAIWATGDDINSSFSLWNYDVRSDDCYKGGSGTEDGGVFNALEISKGINTTDWNINDIWKRLYQCITRANTALQSLDQMDEKTYPLKNQRIAEMRFLRGHAHFMLKQLFKKIVIVNDENMEPDAYNELSNTTYTNDEQWQKIADDFQFAYDNLPEVQIEKGRPAQAAAAAYLAKTYLYKAYRQDGADNALTGINEEDLKQVVKYTDPLIMAKGGYGLETDYSMNFLPQYENGAESVWAIQYSINDGTYNGNLNWGMGLTTPQILGCCDFHKPSQNLVNAFKTDSQGKPLFSTYDNENYEVATDNVDPRLFHTVGMPGFPYKYNEGYIIQKNDDWSRSKGLYGYYVSLKENVDPDCDCLKKGSYWASSLNHIVIRYADVLLMRAEALIQLNDGRITDAISLINEVRSRAAGSTMLIFNYKEDYGVNFKVTPYDLKAYAQDEAMKMLKWERRVEFGMESSRFFDLVRWGEAKDVINAYYVTEASRCSIYKNAGFTENKNEYLPVPFEQISASNGNYTQNFGW
SusD homolog J 570 Bacteroides Thetaiotaomicron Vpi-5482 MKKIIYIATIGITLLTTSCDDFLDRQVPQGIVTGDQIASPEYVDNLVISAYAIWATGDDINSSFSLWNYDVRSDDCYKGGSGTEDGGVFNALEISKGINTTDWNINDIWKRLYQCITRANTALQSLDQMDEKTYPLKNQRIAEMRFLRGHAHFMLKQLFKKIVIVNDENMEPDAYNELSNTTYTNDEQWQKIADDFQFAYDNLPEVQIEKGRPAQAAAAAYLAKTYLYKAYRQDGADNALTGINEEDLKQVVKYTDPLIMAKGGYGLETDYSMNFLPQYENGAESVWAIQYSINDGTYNGNLNWGMGLTTPQILGCCDFHKPSQNLVNAFKTDSQGKPLFSTYDNENYEVATDNVDPRLFHTVGMPGFPYKYNEGYIIQKNDDWSRSKGLYGYYVSLKENVDPDCDCLKKGSYWASSLNHIVIRYADVLLMRAEALIQLNDGRITDAISLINEVRSRAAGSTMLIFNYKEDYGVNFKVTPYDLKAYAQDEAMKMLKWERRVEFGMESSRFFDLVRWGEAKDVINAYYVTEASRCSIYKNAGFTENKNEYLPVPFEQISASNGNYTQNFGW
SusC homolog A 1041 Bacteroides Thetaiotaomicron Vpi-5482 MPGIMKNKKLLCSVCFLFAFMSALWGQNITVKGNVTSKTDGQPIIGASVVETTATTNGTITDFDGNFTLSVPVNSTLKITYIGYKPVTVKAAAIVNVLLEEDTQMVDEVVVTGYTTQRKADLTGAVSVVKVDEIQKQGENNPVKALQGRVPGMNITADGNPSGSATVRIRGIGTLNNNDPLYIIDGVPTKAGMHELNGNDIESIQVLKDAASASIYGSRAANGVIIITTKQGKKGQIKINFDASVSASMYQSKMNVLNTEQYGRAMWQAYVNDGENPNGNALGYAYNWGYNADGNPVLYGMTLSKYLDSKNTMPVADTDWFDEITRTGVIQQYNLSVSNGSEKGSSFFSLGYYKNLGVIKDTDFDRFSARMNSDYKLIDDILTIGQHFTLNRTSEVQAPGGIIETALDIPSAIPVYASDGSWGGPVGGWPDRRNPRAVLEYNKDNRYTYWRMFGDAYVNLTPFKGFNLRSTFGLDYANKQARYFTYPYQEGTQTNNGKSAVEAKQEHWTKWMWNAIATYQLEVGKHRGDVMIGMELNREDDSHFSGYKEDFSILTPDYMWPDAGSGTAQAYGAGEGYSLVSFFGKMNYSYADRYLLSLTLRRDGSSRFGKNHRYATFPSVSLGWRITQENFMKELTWLDDLKLRASWGQTGNQEISNLARYTIYAPNYGTTDSFGGQSYGTAYDITGSNGGGVLPSGFKRNQIGNDNIKWETTTQTNVGIDFSLFKQSLYGSLEYYYKKATDILTEMAGVGVLGEGGSRWINSGAMKNQGFEFNLGYRNKTAFGLTYDLNGNISTYRNEILELPETVAANGKFGGNGVKSVVGHTYGAQVGYIADGIFKSQDEVDNHATQEGAAVGRIRYRDIDHNGVIDERDQNWIYDPTPSFSYGLNIYLEYKNFDLTMFWQGVQGVDIISDVKKKSDFWSASNVGFLNKGTRLLNAWSPTNPNSDIPALTRSDTNNEQRVSTYFVENGSFLKLRNIQLGYTVPAVISKKMRMDRLRFYCSAQNLLTIKSKNFTGEDPENPNFSYPIPVNITFGLNIGF
SusC homolog I 1041 Bacteroides Thetaiotaomicron Vpi-5482 MPGIMKNKKLLCSVCFLFAFMSALWGQNITVKGNVTSKTDGQPIIGASVVETTATTNGTITDFDGNFTLSVPVNSTLKITYIGYKPVTVKAAAIVNVLLEEDTQMVDEVVVTGYTTQRKADLTGAVSVVKVDEIQKQGENNPVKALQGRVPGMNITADGNPSGSATVRIRGIGTLNNNDPLYIIDGVPTKAGMHELNGNDIESIQVLKDAASASIYGSRAANGVIIITTKQGKKGQIKINFDASVSASMYQSKMNVLNTEQYGRAMWQAYVNDGENPNGNALGYAYNWGYNADGNPVLYGMTLSKYLDSKNTMPVADTDWFDEITRTGVIQQYNLSVSNGSEKGSSFFSLGYYKNLGVIKDTDFDRFSARMNSDYKLIDDILTIGQHFTLNRTSEVQAPGGIIETALDIPSAIPVYASDGSWGGPVGGWPDRRNPRAVLEYNKDNRYTYWRMFGDAYVNLTPFKGFNLRSTFGLDYANKQARYFTYPYQEGTQTNNGKSAVEAKQEHWTKWMWNAIATYQLEVGKHRGDVMIGMELNREDDSHFSGYKEDFSILTPDYMWPDAGSGTAQAYGAGEGYSLVSFFGKMNYSYADRYLLSLTLRRDGSSRFGKNHRYATFPSVSLGWRITQENFMKELTWLDDLKLRASWGQTGNQEISNLARYTIYAPNYGTTDSFGGQSYGTAYDITGSNGGGVLPSGFKRNQIGNDNIKWETTTQTNVGIDFSLFKQSLYGSLEYYYKKATDILTEMAGVGVLGEGGSRWINSGAMKNQGFEFNLGYRNKTAFGLTYDLNGNISTYRNEILELPETVAANGKFGGNGVKSVVGHTYGAQVGYIADGIFKSQDEVDNHATQEGAAVGRIRYRDIDHNGVIDERDQNWIYDPTPSFSYGLNIYLEYKNFDLTMFWQGVQGVDIISDVKKKSDFWSASNVGFLNKGTRLLNAWSPTNPNSDIPALTRSDTNNEQRVSTYFVENGSFLKLRNIQLGYTVPAVISKKMRMDRLRFYCSAQNLLTIKSKNFTGEDPENPNFSYPIPVNITFGLNIGF
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-06-29
Deposition Author(s): Ranson, N.A. , Silale, A. , Van Den Berg, B. , White, J.B.R.