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7ZMB
Cryoem structure of mitochondrial complex i from chaetomium thermophilum (state 2)
PDB DOI: 10.2210/pdb7zmb/pdb
Classification: OXIDOREDUCTASE Organism(s): Chaetomium Thermophilum Var. Thermophilum Dsm 1495
Deposited: 2022-04-19 Deposition Author(s): Kuehlbrandt, W. , Laube, E.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.75 Å
Cryoem structure of mitochondrial complex i from chaetomium thermophilum (state 2)
Primary Citation of Related Structures: 7ZMB
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| NADH-ubiquinone oxidoreductase chain 1 | 1 | 378 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MSYSQTINSLVEVVLVLVPSLVGIAYVTVGERKTMGSMQRRLGPNAVGIYGLLQAFADALKLLLKEYVGPTQANLVLFFLGPVITLIFSLLGYAVIPYGPGLAVNDLSTGILYMLAVSSLATYGILLAGWSANSKYAFLGSLRSTAQLISYELVLSSSILLVIMLSGSLSLTVIVESQRAIWYILPLLPVFIIFFIGSVAETNRAPFDLAEAESELVSGFMTEHAAVIFVFFFLAEYGSIVLMCILTSILFLGGYLLISLLDIIYNNLLSWIVIGKYIIFIFPFWGPVFIDLGLYEIISYLYNAPTVEGSFYGLSLGVKTSILIFVFIWTRASFPRIRFDQLMSFCWTVLLPILFALIVLVPCILYSFNIFPVNISLL |
| Subunit NDUFC2 of NADH-ubiquinone oxidoreductase (Complex I) | B | 94 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MVNRILFWTGFGLAVRFWQLGIEMRPFFNRKSLWAYPLFGGVGASFGYWLQSIDEKQTKMLEERKQAILEKRARRAQRQAEAAATAPSPSAQEA |
| Subunit NDUFB3 of NADH-ubiquinone oxidoreductase (Complex I) | C | 93 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MQPTRILRNNGEKPNITGFDMREFLRHTKTPTYDPWERHEAWRYTGRFSRFNRFKGALPGFGIATVAFTAYCVFEHFFLKDDHHGHHGEKEHH |
| Subunit NDUFB10 of NADH-ubiquinone oxidoreductase (Complex I) | D | 105 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MPTPESEAFLAKKPQVPPTFDGVDYEDNKRLKQAQDAIIREQWVQVMMGRLVREELSKCYYREGVNHLEKCGKLRERYLQLLANAKVKGYLFEQQNYWSKENQQQ |
| Subunit NDUFB2 of NADH-ubiquinone oxidoreductase (Complex I) | E | 46 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MAGGGQHVSRVHRFLATGLGASMWFWIFYRAKKDGPVLLGWKHPWD |
| NADH dehydrogenase-like protein | F | 95 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MSGRYAFAKGVKELRFLFCQTSQHSAEARSFLNRAYPIMKKHNPTIPILLREAQGTIPRVYARYEFGREKMESLEGLTDKQIEETVAKLVKTEGA |
| Subunit NDUFA3 of NADH-ubiquinone oxidoreductase (Complex I) | G | 82 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MSATTPRFWSTPLKYCRWAARERPALFFSVVIGALGPVTLATVPPLRRLIGDVDAAPIPLTYPIPPGPRKQLKGYDDDTEDN |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit | H | 134 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MSYPTRTLANLRKIGLKEYFRQLLYIGDTKYGELVGVDKFGNKFYENKEELPLRTRWVDYAKHDYDAAHIEPMWHAWISYQVDTPPTREPLTQIERPWAPKEHVPNRSFTRGAYKPYNTTQPKIQSWEPKAAPR |
| Subunit NDUFB6 of NADH-ubiquinone oxidoreductase (Complex I) | I | 93 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MGGGPKIPYPKHVWSPAGGWYAQPANWKQNTAIFGLVIFGITAMVWKYSAEHEVRHKMPEPDRFYPSRYWVKQIKDYERAQKEKQQNNTEASS |
| Subunit NDUFB4 of NADH-ubiquinone oxidoreductase (Complex I) | J | 75 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MAGLQHYKIAMDPALVRLGSMISNRYKYFRWTKRTALVSFMYVVVVPSTIGYLAYKTDGLWDLRAKRRGDLISER |
| NADH-ubiquinone oxidoreductase-like protein | K | 230 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MISSARTGASLILRARPATQLIPLRAAAAAHLSSSARTQAAATSSSTAVEPYPGYELRKSLRKEVPLPSQEGTKGLVQYALTTLDIITNWARQGSFWPMTFGLACCAVEMMHLSTPRYDQDRLGIIFRASPRQSDVMIVAGTLTNKMAPALRQVYDQMPDPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTSEALMYGIFQLQRKMRNTKITRMWYRK |
| NADH dehydrogenase subunit 2 | 2 | 571 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MIMISILSLLLSTSVTLRRDMSILFNRISIIALAYCILHDTMSLSFISKGIGLHGGLLHITNLTQIFHIFIFIISILILQLTSFYPRKVWIPEYSSLKDIFFNKILYYRTKIINKMGEHMKIIEYPLILLFVISGAVFLISTNDLVSIFLSIELQSYGLYLLSTIYRNSELSTTGGLIYFLLGGLSSCFILLGTSLLYVNSGTTSLDGLYILNSISDVNPVVAGVGEDGGLTSWYKPYYLNFSLLIFSIGFLFKVSAAPFHFWSPDVYDAIPTIVTTFVAIIAKISIFIFLLELVYYTNSNANSYLSEFSWTYALLISSLLSLIIGTVVGLTQFRIKRLLAYSTISHVGFILLALSVSSIESTQAFIFYLIQYSISNLNAFFILITIGFSLYGYVTNNKEYKSLLDKNNSPIQLISQLKGYFYINPLLSLSLAITIFSFVGVPPLVGFFAKQMVLSAALDNGYIFLSLIAIITSVIGAVYYLNVIKEIFFYSPEHEVNPVLNESDSNFSLRILNEKNVLIRSVLLKGRNIFISSPFSITISIITNVILLFIFMNKEWLSMGTILVQILFSA |
| NADH-ubiquinone oxidoreductase chain 4L | L | 89 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MNITLILFLIGILGFVLNRKNIILMLISIEIMLLSITFLILLSSLNMDDIIGQTYAIYIIVVAGAESAIGLGILVAFYRLRGSIAIEYK |
| NADH-ubiquinone oxidoreductase-like protein | M | 168 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MYASRGVRAVAQARQLISKRTFTATARQLSQTQTPTPAAPTATAEAEVAETGRPASAVMQAPNRAEVWSRSQRPRSEAMAGPRFEQTDFDAQPRPWAAIELIHKQPVRWTHDRIVACDGGGGPHGHPKIYINTDKPEIATCNYCGLPFANEHHRKYLESLPQTSYPLN |
| Oxidoreductase-like domain-containing protein | O | 380 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MRRTILQARPSRVLSRALSSAHGSARPSFAIARSPNEQVFPAGAFYESILRWNPNPVPKPQPIEPPAPEPEPVVEEATPAEPEPVPEPVAEEKTPEPTPAPVEEKSAAPVEAEAEPAPVEEKAAVPEAAPEPEPEPVAEDKPAPEEKKSSRSPKRQQQEESSSAEKPAEKPIRSSGRLDGASAPSPEPQPQDSSQEKPSITFLSGLSGPTSTSSYQSRLESIRSRSRLIAGVLVPPQPTEPDNCCMSGCVNCVWDAYREEMEAWAAAKAEAERRLAAQEVSSVVGTTEESMHAVEDGKRVERTLGVHGEVADRTGDMARELEKGSTSMEEDGAGFGERMEWDEGLYKDVPVGIREFMKQEKRLREERLKRNRKETEHQQG |
| Acyl carrier protein | Q | 141 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MFRSAVLRSAAAATRTTIRSIPPAAAKKFAVAPVSRVTSFIPKTASWQVIRCYASNEGLQKVEVYERIKSLLAGFDKVNDPNNITETAHFANDLGLDSLDTVEVVMAIEEEFSIEIPDKDADQIHSVDKAIEYILRQPDAH |
| NADH-ubiquinone oxidoreductase B14 subunit-like protein | P | 124 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MAVQPTKFAVTVRQSRNWADAKQRVIAAYRAWIRAAPEIQTMYSIPFPVSHIRTRIRQEFERHRYVNKLNVVDVLLQQSNADFQETMNFWRQQSHVMAFFKEEHFRGEKRLPSNFITGFLEGRN |
| Complex I-B22 | R | 99 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MSNRQAALSLYRRALKLALDWTVHRNLWRGQALYIRSLFEKNRNVTDPRLQRALLKETEKLLEKWKHPDPYCPPTAPGGSKYERNLPVPNLEPPPPLKF |
| Complex I-ESSS | S | 143 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MDGGPPTFAFRPTARQAPGKLSSAPVTTRLAAAALSRASTVSSKALTPARFRFFSTTQRRAGGHGMQYDPPTGWLWGVRPGEKYQNEGWEGPFFYGFWGSLIVFAIAYAYKPDTSIQTWALEEARRRLEAEGILEDPNPTKKE |
| NADH-ubiquinone oxidoreductase | U | 186 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MATRKPAFNQHVLLDTTPLPDSIPKVKEIGASSAPLLSASFFIGARCKDYNDDYMQCKNENPGRGEFECLKEGRRVTRCARSVLKDINTHCLEQFRAHWQCLDNNNQQLWQCRPAEWKLNKCVYENLKLEKVIPDQPKNSTPVHLRQRQIFAHHAIPPWERPFIPGQPEPQLPAGIEIPEKYKNQS |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 | W | 121 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MPQDMPPPGGYEAVQYKRNLPSRGLFRPRPLLAGAAVLMLYGWYKLVKGIREQNELAREKMWARIHLIPLLQAEEDRDHVRRYLADQAREKGLLGENIKVYNSDRYVRPTFAVTPSKPAQE |
| NADH-ubiquinone oxidoreductase-like protein | X | 191 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MSNTPTQTYQFPSKTVKTDYPLIDNDPHFTRVIRYARPSDYAHGLAAAAAGPAALWLMERISPSQVGRGGFAKAMRLAGFIGLAGGFLYFYQRSILRFYGMSENAREVEMDMREMTDRVKAGLPLYGESRLSPAMQGVAARQSRYSALFFGVMPWFNFVNHNQHGVDTAKYYQQAERELEAERLAREQAQQ |
| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial | Y | 210 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MSSLRPAATSAARLLRNSTASSRATAVAVMPCRAAHNIHVPVQKERTKEDSPLATLPRNAPDYNVPIDIATSTFTPVPKNVQDGSEENVVPAGLISGAPMELQARTVRIYKPAKPATQSGEKNTQLWRMDWDVLGKGHRWENPLMGWQSSADFMQGTHLTFKTKEDAIAFAEKQGYEYFVQEPNERHFRPKAYANNFLYSPGKLKHIRTK |
| NADH-ubiquinone oxidoreductase chain 3 | 3 | 146 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MSAMSIYIIFVSIIAILFLAIDLIFAPHNPYKEKLSAFECGFHSFSQSRSPFNISFFIYGLVFLLLDLEILLLYPFAVSEYVNSAYGLAAALIFIGIITIGFVYELGHDALKVHSRQNISTKDLKSSVVISYLGNINNDSVNLHIK |
| NADH-ubiquinone oxidoreductase-like protein | Z | 196 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MASKAAAAAASNAVSITKKYTVQSTGIWERIRRALVIDPNRSNGVPLNPYNRNPSPGDNPPLEYTDPVTIPAGDIADNPYWKRDFRRNYPRPSVIAQAQQVALLSVGSAAQPRVELIGEEGTKALVAAEEEGKEKGVAKYLEEKGAEEAKRVLALTGGLPPTPSGQTMVTGQWDVHKYGLAEEQSYGGSYPCRSFV |
| NADH-ubiquinone oxidoreductase-like protein | A | 749 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MLRQTLARSAWRTGKHPAAAARTAGAATRAFSASAQRPAEVELTIDGKKVSIEAGSALIQACEKAGVVVPRYCYHEKLAIAGNCRMCLVEVERSPKPVASCAWPVQAGMVVKTNSPLTHKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMRYGADRGRFHEIGGKRAVEDKNIGPLIKTSMNRCIHCTRCVRFMNDIAGAPELGSTGRGNDLQIGTYLEKNLDSELSGNVIDLCPVGALTSKPYAFRARPWELKRTESIDVLDGLGSNIRVDSRGLEVMRILPRLNDDVNEEWINDKTRFACDGLKTQRLTMPLVRRDGKFEPATWEQALTEIAHAYQTLAPKENEFKVIAGQLVEVESLVAMKDLANRLGSENLALDFPGGSQPLAHGVDIRSNYLFNSKIWGIEEADAILLVGTNPRHEAAVLNARIRKQWLRSDLEIAAVGQPWESTFDYEHLGTDLAALKNALSGPFGEKLKKAKRPMIIVGSGVTEHPDAKAFYETVWSFVEKNASNFLTEEWCGYNVLQRAASRAGAFEVGFVVPSPEVAATKPKFVWLLGADEFDPADVPKDAFIVYQGHHGDRGAEIADIVLPGAAYTEKAGTYVNTEGRVQMTRAATGLPGAARTDWKIIRAVSEFLGVPLPYDDVAQLRDRMAEISPALAAYDVVEPVALRHLSKVQLVDQNKGAKVTGEPLKKVVENFYFTDVISRSSPTMARCSAAKETGDPRTNFMAPGMEEDRPMGQIAYGA |
| NADH-ubiquinone oxidoreductase chain 4 | 4 | 542 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MSLLYVLLIIPIIGIFLISTIDSFYPVTNTNIVLNKKFFRGFNDARQPIKYLYFSEGESFNIENKEDSFFNVSYYKKIALITTILNLIVSLIIYILFDFSNNQFQFIQENLDLSFYDIYLGVDGVSIYFVLLTTIIMPIALVSNWNSITNNIKSYLIIMLLLETLLLAVFLVLDVLLFYIFFESILPPLFILIGLFGSSNKVRASFYIFLYTLLGSLFLLLSILTMSSIVGTTYFDVLLKSSFEYTTQLFLFFGIFIAFAVKTPVWGLNSWLLRAHVESPLGGSIVLAAIVLKLSLYGVFRLILPILPQASLNLTYIVYAIGAITVLYASFSTLRTVDVKELIAYSSVAHAAIYLMGVFSNTIQGLEGAILLGLAHGFVSSGLFICAGGILYDRTGTRLIYFFRGLTQIMPLFSLFFFILCLGNAGTPLTLNFVGEFMSLYGTLERLPIAGMLASTSIIFSAAYSIYMYNRIAFGGSVSLYFIDCFRDLTKREFFILFTLVSFTVILGIYPSFVLDGLHYNISSVVYGIEPNASYLTQGGNL |
| Subunit NDUFB5 of NADH-ubiquinone oxidoreductase (Complex I) | N | 184 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MLALRQRAALLARRVRPTVVVPRNARTYASSHDHDHHDHHHDHGHNVEEPLGAAFYIAVGGIASSFVIYNISRPGPNGEPSSLHKWFSKISDYKDEWETRNTLMAAALEQAAHDKHLLLTAERSRHIELKYPEVFSHGSPFNVPAGFYPNLDHVIEHYRKQHLEEEERKAKKLAAAAAAASEAR |
| NADH-ubiquinone oxidoreductase chain 5 | 5 | 679 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MYLSIIILPLLGSVVSGFFGRKVGVSGAQLITCSSVIITTILSIIAFFEVGFNNIPVTINIFRWIDSEWFIINWGFQYDSLTVSMLIPVLIISSLVHIYSISYMSSDPHNQRFFSYLSLFTFMMIILVTANNYLLMFVGWEGVGVCSYLLVSFWFTRIAANQSSISAFLTNRVGDCFLTVGMFAILWSLGNLDYATVFSLAPYINSNVVIIIGICLLIGAMAKSSQVGLHVWLPMAMEGPTPVSALIHAATMVTAGVYLLMRSSPLIEYSSTVLLLCLWLGAITTVFSSLIGLFQQDIKKVIAYSTMSQLGMMVLSIGLSSYNIALFHLVNHAFYKALLFLGAGSVIHAVADNQDFRKFGGLISYLPLTYSVMLIASLSLVAFPFMTGFYSKDFILESAYGQFSFSGVAVYIIATIGAIFTTLYSVKVLYLTFLSNPNGPRTYYRLAIDNFFSAQAIKSYKPAHEGDFFLTLPLVILALFSIFFGFITKDIFIGLGSNFFVDNSLFIHPIHEIMIDTEFAVPVLFKLLPFIFTISFSVIALTLSELLSELVIYFKFSRFGYNIFGFFNQRFLIEFFYNKYITNLILNLGGQITKILDKGSIELFGPYGLERGLVKLSKNISSLSTSHVTTYALYILVGFILYLIYNNLLLDYSYLLLIIILLLLLMMIGESNSEDVTLH |
| NADH-ubiquinone oxidoreductase chain 6 | 6 | 224 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MNSQISLLLLKEIYTNGSTHIMLDILSVLAVISGICVIISKNPIVSVLHLIGLFAYVSFYLILIGLNFVGLSYLIVYIGAVSILFLFILMLINIRTSELQSNTSNSIPLTILVGIIISSFLFKMLPYGVIISNQFNSSNLNENLYTIQIVGGEDNNINNINTDKNDLFFITSKIWDGALAENNHISSIGNIMYTNYNVWLILASFILLLAMVGAIVITIKPRKI |
| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 | 8 | 86 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MATDAAETSRRATREEMRDAKVPLAYRDSCAHLLIPLNRCRYETYYLPWKCEDERHSYEKCQYLEFKKRVQKMEELREAKGGARSN |
| Subunit NDUFS5 of NADH-ubiquinone oxidoreductase (Complex I) | 9 | 785 | Chaetomium Thermophilum Var. Thermophilum Dsm 1495 | MASGYGLNGGPSRCFPFWQELLACYVTNSSEDNPDGKNKCIPVMEDYYECLHHRKEAARVRALQAAYREAEAKKLQENPPTAGQIRNLGLLNKEEDTKKVHCATATQQWMKMCFALSAKMPCLRGIEVFLTTRPDNEKIPEYPHPEGTSARVICGQHLIRSPSLASNLSNSAITPPSSFSPRKANPLVSVYLPSVPGTPFTINYKISQVPPEPCKYLFFRLYINARPMVSWGIDPHSRPYGKVIKSLWLPSDDRYRGLVGFEKRSFVFLPGEEFKSVAEDGGLIEVQVFRAKDRRARTPKLETFRFRDNYGIAAPSIGLLDKPQNAFFYDWLLIDPKDEPFAKFRMHYRSWRNLKSLNLIPSSEWELLLAVSPKALRTAASTGKIEKPTSPAFSDSDSDDSLCSATDSDECVFDDHSKKTKSNRSKESPFAFLNSPPERFRAMAPSSEKLPQPSKLLRDSQRAPYQSRPLPELPVEAGVNSTGLNPPSVKVAADLRRKPSATSMESNAVSITPSLLRCMEEGTLDLEKAEVGIAKLVKVAASGSEPSSSSSSATQLTVSAVREVELRPPQPERKGGLPMDYSFSDYEKSSQSSFGDDERMSNISDMEEKPFPAPPTCYLPTTGSGLERELAMFDSPSPSPVPYSAMEPPVTPSPSSTPYKTKLGRKPLLFSRRLGLFSPRKSLPSDFLLGQAKKLVVEEETTNSNVSLAFGELTVTDMRAESPSPAPKGKPLRRFSTIRVEEISIKEKRPLFNSLRRIASASPRKLAGRVLSMDLGKKGGEEKEG |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-04-19 Deposition Author(s): Kuehlbrandt, W. , Laube, E.