7ZLI
Cryo-em structure of c-mannosyltransferase cedpy19, in complex with dol25-p-man and bound to cmt2-fab and anti-fab nanobody
PDB DOI: 10.2210/pdb7zli/pdb
Classification: MEMBRANE PROTEIN Organism(s): Caenorhabditis Elegans , Synthetic Construct
Deposited: 2022-04-15 Deposition Author(s): Bloch, J.S. , Boilevin, J. , Darbre, T. , Goddard-Borger, E.D. , Irobalieva, R. , Kossiakoff, A.A. , Locher, K.P. , Mukherjee, S. , Reymond, J.L.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.99 Å
Cryo-em structure of c-mannosyltransferase cedpy19, in complex with dol25-p-man and bound to cmt2-fab and anti-fab nanobody
Bloch, J.S. , Boilevin, J. , Darbre, T. , Goddard-Borger, E.D. , Irobalieva, R. , Kossiakoff, A.A. , Locher, K.P. , Mukherjee, S. , Reymond, J.L.
Primary Citation of Related Structures: 7ZLI
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CMT2-Fab heavy chain | H | 236 | Caenorhabditis Elegans , Synthetic Construct | EISEVQLVESGGGLVQPGGSLRLSCAASGFNISSSSIHWVRQAPGKGLEWVASISSSYGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSSSVYWSWWGYSAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT |
| Anti-Fab nanobody | K | 123 | Caenorhabditis Elegans , Synthetic Construct | GSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS |
| CMT2-Fab light chain | L | 215 | Caenorhabditis Elegans , Synthetic Construct | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQGASEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| C-mannosyltransferase dpy-19 | A | 707 | Caenorhabditis Elegans , Synthetic Construct | MAKKPKNSPEKSKYSSDTSSSLYSQTWLASVVIIGLLVGYINYQHVYTLFENDKHFSHLADFEREMAYRTEMGLYYSYYKTIINAPSFLEGVQEITHDTVTEHGHEINTLNRFNLYPEVILAFLYRPFRAFAKSANWQIELCWQVNRGELRPVESCEGIGNPHYFYITGVFIVAGTVASSIFYLGVLVSDSIFGGFLSVLCFAFNHGEATRVQWTPPLRESFAFPFIIGHIAILTFVIKYKKSGHSMILLLTSMAVPALLFWQFTQFAFFTQICSIFLAFSLDLIPFSTAKTVIHSHIISFLIGFLLLFGNEMMITALYFPSILALGMIIYISPLLSNLKFRPAYVLFLAIIFASITLGLKIGLSKGLGIEDDAHIFDILRSKFTSFANFHTRLYTCSAEFDFIQYSTIEKLCGTLLIPLALISLVTFVFNFVKNTNLLWRNSEEIGENGEILYNVVQLCCSTVMAFLIMRLKLFMTPHLCIVAALFANSKLLGGDRISKTIRVSALVGVIAILFYRGIPNIRQQLNVKGEYSNPDQEMLFDWIQHNTKQDAVFAGTMPVMANVKLTTLRPIVNHPHYEHVGIRERTLKVYSMFSKKPIAEVHKIMKEMGVNYFVFQLMNCSNDERRPECVYRGMWDEEDPKNSGRTALCDLWILAANSKDNSRIAPFKIVYNANRNYIVLKILEDYKDHDGDYKDHDIDYKDDDDK |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-04-15 Deposition Author(s): Bloch, J.S. , Boilevin, J. , Darbre, T. , Goddard-Borger, E.D. , Irobalieva, R. , Kossiakoff, A.A. , Locher, K.P. , Mukherjee, S. , Reymond, J.L.