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FASTA Sequence PDB Format mmCIF Format
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7ZLH

Cryo-em structure of c-mannosyltransferase cedpy19, in apo state, bound to cmt2-fab and anti-fab nanobody

PDB DOI: 10.2210/pdb7zlh/pdb

Classification: MEMBRANE PROTEIN
Organism(s): Caenorhabditis Elegans , Synthetic Construct

Deposited: 2022-04-15
Deposition Author(s): Bloch, J.S. , Goddard-Borger, E.D. , Irobalieva, R. , Kossiakoff, A.A. , Locher, K.P. , Mukherjee, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.75 Å

Literature

Cryo-em structure of c-mannosyltransferase cedpy19, in apo state, bound to cmt2-fab and anti-fab nanobody

Bloch, J.S. , Goddard-Borger, E.D. , Irobalieva, R. , Kossiakoff, A.A. , Locher, K.P. , Mukherjee, S.

Primary Citation of Related Structures: 7ZLH


Proteins
Molecule Chains Sequence Length Organism Sequence
CMT2-Fab heavy chain H 236 Caenorhabditis Elegans , Synthetic Construct EISEVQLVESGGGLVQPGGSLRLSCAASGFNISSSSIHWVRQAPGKGLEWVASISSSYGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSSSVYWSWWGYSAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
Anti-Fab nanobody K 123 Caenorhabditis Elegans , Synthetic Construct GSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS
CMT2-Fab light chain L 215 Caenorhabditis Elegans , Synthetic Construct SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQGASEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
C-mannosyltransferase dpy-19 A 707 Caenorhabditis Elegans , Synthetic Construct MAKKPKNSPEKSKYSSDTSSSLYSQTWLASVVIIGLLVGYINYQHVYTLFENDKHFSHLADFEREMAYRTEMGLYYSYYKTIINAPSFLEGVQEITHDTVTEHGHEINTLNRFNLYPEVILAFLYRPFRAFAKSANWQIELCWQVNRGELRPVESCEGIGNPHYFYITGVFIVAGTVASSIFYLGVLVSDSIFGGFLSVLCFAFNHGEATRVQWTPPLRESFAFPFIIGHIAILTFVIKYKKSGHSMILLLTSMAVPALLFWQFTQFAFFTQICSIFLAFSLDLIPFSTAKTVIHSHIISFLIGFLLLFGNEMMITALYFPSILALGMIIYISPLLSNLKFRPAYVLFLAIIFASITLGLKIGLSKGLGIEDDAHIFDILRSKFTSFANFHTRLYTCSAEFDFIQYSTIEKLCGTLLIPLALISLVTFVFNFVKNTNLLWRNSEEIGENGEILYNVVQLCCSTVMAFLIMRLKLFMTPHLCIVAALFANSKLLGGDRISKTIRVSALVGVIAILFYRGIPNIRQQLNVKGEYSNPDQEMLFDWIQHNTKQDAVFAGTMPVMANVKLTTLRPIVNHPHYEHVGIRERTLKVYSMFSKKPIAEVHKIMKEMGVNYFVFQLMNCSNDERRPECVYRGMWDEEDPKNSGRTALCDLWILAANSKDNSRIAPFKIVYNANRNYIVLKILEDYKDHDGDYKDHDIDYKDDDDK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-04-15
Deposition Author(s): Bloch, J.S. , Goddard-Borger, E.D. , Irobalieva, R. , Kossiakoff, A.A. , Locher, K.P. , Mukherjee, S.