7ZKP
Late assembly intermediate of the proximal proton pumping module of complex i with assembly factors ndufaf1 and cia84
PDB DOI: 10.2210/pdb7zkp/pdb
Classification: ELECTRON TRANSPORT Organism(s): Yarrowia Lipolytica
Deposited: 2022-04-13 Deposition Author(s): Laube, E. , Schiller, J. , Vonck, J. , Zickermann, V.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.2 Å
Late assembly intermediate of the proximal proton pumping module of complex i with assembly factors ndufaf1 and cia84
Laube, E. , Schiller, J. , Vonck, J. , Zickermann, V.
Primary Citation of Related Structures: 7ZKP
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Subunit NIMM of NADH:Ubiquinone Oxidoreductase (Complex I) | D | 87 | Yarrowia Lipolytica | MAIPFEALLPYGIIFGLLTAGGGAMQVLHVYRNGGVRDRFAIDQWDSQMMERDLRLNGGQGRKQVDQATAPEAFKHNHVWKSERPLI |
| subunit NI9M of protein NADH:Ubiquinone Oxidoreductase (Complex I) | G | 78 | Yarrowia Lipolytica | MINANPGFWNGPFRYLRWSAHNRPHLFFAFAIGIAGPVAALTLTPLRRKYLYPDHSPLPQSYPLPQRAREQLTGFDDE |
| Subunit NEBM of NADH:Ubiquinone Oxidoreductase (Complex I) | B | 74 | Yarrowia Lipolytica | MALFTSLVGASGLGFATKFLSNKIRLKPAGYYPLGYVFSGVAWAGLGLVLHNVHQHSLEVLEKKKTALSEQRTE |
| Subunit NIPM of NADH:Ubiquinone Oxidoreductase (Complex I) | 9 | 89 | Yarrowia Lipolytica | MTAAGISLTGGRNRCFSEWQSFMHCTAKTDAKSRAQCLPNFEDYMECLHHTKEKARLREIESVLKQKKEGLEAPPVKVIPVKAIGLVEE |
| assembly factor CIA84 | C | 852 | Yarrowia Lipolytica | MPKNALLRSARQVAISRVFATSRASHVVSHAPILASVRPRSNPAPYRRNFSSSRALRNDYGLDTAERSLKESLVPFNGAPVDRKVVRDQLMELISVSPGQVFPISVIPVVKSAYYELFRENERVLSAGDTKTLFGAVAGNNPEDVQDLPFVLAVYHQAEQAAETNRDSRDNILLLGKYFLFQDRLDNFWKLLEAQIKTHDDVDAGFVKQLLELISVDPHLTLGNVARVLQLKTDNHVSSSDELRNALSATLEQLYYKENEGSEFFLSLVENHILDSKDFTPSDSVVAMILNTCVNEGREDLGQSVLRNVVSRVGNLSPGQEDPQNCWGFWSSVAMDLHGSKTDVKAFISRLEALPHRTKATWDILIRYAVFKADLAGRNDLLQVRALLAEMQKVGFEPDAETYFDAYRSSKSIKPDVVHLFEAELDIEKDTSIFAIEMDKALKNHDTLEALSIFYESFEQGAQWENKRLHMEAMTELLIQYAGLNDTSVADILQLVQRIEPICAQGRIPYSAETAIAQNVLQRHSDTANFYTFMNRQYGNTADKVTKQDPQIRPHTYQVIHDYIYSCESERADLAWEMYGLLHKFYVVPFADYYKAIKFFAQDVKRQDYALLTFQQIRKNHDLHGQPAATSEMVAFLFHEFAKTKYKRGIKRLHEVVALETSFDVNRDVLNEMMAAYVSVEDLNRVQDCWAQLQQLPPSIGANNRSVDVLLSYFKDNIHYTERTWQGIPEFGLLPTLENYEQYLINNCRTGNYRRALEITKNMEIDSGLKPTAKIIAAVYNYTFTEQRKLEVEQWAEKAHPEMWLELKEGDKLKSLCLPANSDNDNVESLLKQASADMDEEMSGGIVKVESV |
| CIA30 domain-containing protein | A | 290 | Yarrowia Lipolytica | MSFLTKALGGLKRLRPTETTEQVLVNFTKPNSLETVLTKCDEELGGYSTVNLALERPTTGKPYGRFFGNLSLDLPKDNKMVTRSGFAMFRTLDQPSSMFKTNAWNWEQYRHLELRVRGDRRKYFVNVQSATPLASDLYQHRLFIQTPGEWETVVIPIDDFILTNKGVVQEQMAMDTANVYTVGIGLIDRQYGPYNLDIEYIKAVAHPPLEFKPKKEYEVEKETILLTPGQPMELGKGKVKELEENLYFQGAEAAAKEAAAKAWSHPQFEKGGGSGGGSGGSAWSHPQFEK |
| NADH-ubiquinone oxidoreductase chain 4L | L | 89 | Yarrowia Lipolytica | MFIGTIILVLSFLGFVFNRRNIILAFICLETMLLGINLILLRNSVLFDDISGSLFAIVIIILAGVESAIGLSLLVSYYRLRGVINSYGI |
| Subunit NUPM of NADH:Ubiquinone Oxidoreductase (Complex I) | U | 172 | Yarrowia Lipolytica | MPREAAAHWVPFEDKANMPDNVPDVVEVGATSAPLLSASYFIGAKCKPYNDDFMLCREESQGSGAIDCLKEGRRVTRCAVSVIEDINKSCLDEFRLHWQCLEQNNHQLSGCRKAEALLNKCVFTKLNLEKKIPGLRPDEEPVFLKKDPWIKPAVDDFKSVRAYAEAKKNGTL |
| Subunit NB6M of NADH:Ubiquinone Oxidoreductase (Complex I) | W | 123 | Yarrowia Lipolytica | MPSVGQDLPPVGGYEPVQWRRNLPARGFRPLVYLAALCGICGYGFYRALGGIQERRELKREKLWARIYLMPLLQAEEDRQTVRRSIAQLEREKEIMKGTGFDVDKSVYNDGKFHAPALMIPPK |
| NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit-domain-containing protein | X | 169 | Yarrowia Lipolytica | MSSSTPLVKTSVNYSYGDYPLIDADPHFKRVVGYMRPSDYGVIGLATAALPAGICFAEWLDPVKGKFARPSVKFLRVATMLGFAVGFGAAYARSSLRFFGVTENAREYKKDEAQMAARKAAGLEPYGTSSLTPELQEIAAKNSAHSIAGLFIFPWFNFVNHPYHGREQK |
| NADH-ubiquinone oxidoreductase chain 1 | 1 | 341 | Yarrowia Lipolytica | MIINIVEILIFLVCVLFSVAYLTVAERKTLAYMQRRLGPNFVGYYGLLQAFADAVKLLLKEIVLPKESNYIILVISPLITLITALIGWVVIPLGPGITLGELNLGILFSLAIGSLGVFGSLLSGWSSNSKYSLLGSIRSTAQLISYELILTSIFIIIIMFVSSLNITTIIETQRVVWYCIPLLPLLLIFFIASVAETARPPFDLTESESELVAGYFTEYSGSPFVFFFLAEYSNIILISAFNGYLLLGGYLSFNYSYLFNILFNDYSYVSFLFEGLINSSAYAIKLVFLMFSFIWVRAAFPRFTYDNLINFCWIILLPLLFGIFLIIPSTLYIFDSFPTLI |
| NADH dehydrogenase subunit 2 | 2 | 469 | Yarrowia Lipolytica | MLILAIISLITFVSMSKLSDNRAIIRLINIYLILVLVLDSFLYLLFLNNQTYTVMGELLIFNSFTFYIDMLIYFIMIVISSLYGYNLYNNNLYKTLFEPKKELIILFLINILGALLIVHSNDFITLFVAIELQSYSIYLITAIYNSSYKASKASMLYFFMGGILSILIAYSINTYYSVLNSYTLHSLDSLIINTLDLNLILIALSLGLLFKIGIAPLHKWLISIYENTPILITIYISLIPKISILSYLVLSNISINSLVISILAILTLLVGSVGGLLQIKIKRLLAFSGLTNAGYMMLLLLLNNNEFSYLYYITQYSISHLAIFMIIIFSIYYINYINNQYNPIIYVNQLKGLIHDNAYLVLSMAIVVFSFIGIPPLLGFFGKLNILMSILNNGYYFISIVLIVASLISALYYLYLLNVSIQDKNNILINSNETVSSVLSYILSSLIILITFGFIYNSLIIDIFNVYFN |
| NADH-ubiquinone oxidoreductase chain 3 | 3 | 128 | Yarrowia Lipolytica | MNTFIIFIILIPIVGFALLAVNILLAVYKPYNEKLGAFECGLTSFNQTRLAFNAAFILVAILFLPFDLEISTLLPYVMSIYLVSNYGFTIVLLFLLILIIGFVYEINTNALKINKHNKPNTDSLIYKL |
| NADH-ubiquinone oxidoreductase chain 6 | 6 | 185 | Yarrowia Lipolytica | MMYLTYYFIEITIFLAILCTIFIISAKNPMVSILYMIALFVIAAMYLYLIGLGIFSLLYIMIYIGAIAVLFLFIITLLDINSTELSVKSNIRDLPLVLISLIVLTISGLMIYSNDSILINKLLEAFGNDYNTIITQDWFNIENTTLLTTIGNVLLTNNAFILLVLAIVLLLGIIGPISITMKHKE |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-04-13 Deposition Author(s): Laube, E. , Schiller, J. , Vonck, J. , Zickermann, V.