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FASTA Sequence PDB Format mmCIF Format
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7ZFD

Sars-cov-2 omicron rbd in complex with omi-25 fab

PDB DOI: 10.2210/pdb7zfd/pdb

Classification: VIRAL PROTEIN
Organism(s): Salmonella Enterica , Gammaretrovirus

Deposited: 2022-04-01
Deposition Author(s): Huo, J. , Ren, J. , Stuart, D.I. , Zhou, D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.39 Å

7zfd
Literature

Sars-cov-2 omicron rbd in complex with omi-25 fab

Huo, J. , Ren, J. , Stuart, D.I. , Zhou, D.

Primary Citation of Related Structures: 7ZFD


Proteins
Molecule Chains Sequence Length Organism Sequence
Omi-25 heavy chain H 228 Salmonella Enterica , Gammaretrovirus QVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQVPGKGLEWVSGISWNSGSIVYADFVKGRFTIARDNAKNSLFLQMNSLRAEDTALYYCAKSTALRHQYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
Omi-25 heavy chain A 228 Salmonella Enterica , Gammaretrovirus QVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQVPGKGLEWVSGISWNSGSIVYADFVKGRFTIARDNAKNSLFLQMNSLRAEDTALYYCAKSTALRHQYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
Spike protein S1 E 209 Salmonella Enterica , Gammaretrovirus PNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNHHHHHH
Spike protein S1 F 209 Salmonella Enterica , Gammaretrovirus PNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNHHHHHH
Omi-25 light chain L 214 Salmonella Enterica , Gammaretrovirus AIQMTQSPSSLSASVGDRVTITCRTSQTISSYLNWYQQKPGKAPKLLIYDASSLQSGVPSRFSGSGYGTDFTLTISSLQPEDFATYFCQQSYNTPYAFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Omi-25 light chain B 214 Salmonella Enterica , Gammaretrovirus AIQMTQSPSSLSASVGDRVTITCRTSQTISSYLNWYQQKPGKAPKLLIYDASSLQSGVPSRFSGSGYGTDFTLTISSLQPEDFATYFCQQSYNTPYAFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-04-01
Deposition Author(s): Huo, J. , Ren, J. , Stuart, D.I. , Zhou, D.