7YX8
Crystal structure of the am0627 (e326a) inactive mutant in complex with psgl-1-like bis-t glycopeptide and zn2+
PDB DOI: 10.2210/pdb7yx8/pdb
Classification: HYDROLASE Organism(s): Akkermansia Muciniphila , Synthetic Construct
Deposited: 2022-02-15 Deposition Author(s): Borges, R.J. , Clausen, H. , Companon, I. , Corzana, F. , Garcia-Garcia, A. , Gonzalez-Ramirez, A.M. , Hurtado-Guerrero, R. , Liao, Q. , Narimatsu, Y. , Rovira, C. , Taleb, V.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.5 Å
Crystal structure of the am0627 (e326a) inactive mutant in complex with psgl-1-like bis-t glycopeptide and zn2+
Borges, R.J. , Clausen, H. , Companon, I. , Corzana, F. , Garcia-Garcia, A. , Gonzalez-Ramirez, A.M. , Hurtado-Guerrero, R. , Liao, Q. , Narimatsu, Y. , Rovira, C. , Taleb, V.
Primary Citation of Related Structures: 7YX8
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Peptidase M60 domain-containing protein | A | 441 | Akkermansia Muciniphila , Synthetic Construct | GGGGGPDYLYAEYRALPSPRQTGKNLRIGDGFSKYDNMTGVYLEKGRHVVLVGKTEGQEISLLLPNLMRKPAEGVQPTKDPNGWGLHKKQIPLKEGINIIDVETPANAYISYFTEDAGKAPKIPVHFVTGKANGYFDTTRGDTNKDWVRLLDQAVSPIMDARGKYIQVAYPVEFLKKFTKDRGTELINAYDKLIGIQYQLMGLDKYGKIPENRVLARVNFNYYMFRDGDGVAYLGNDGTMRMVTDPENVLKGDACWGFSHAVGHVMQMRPMTWGGMTEVSNNIFSLQAAAKTGNESRLKRQGSYDKARKEIIEGEIAYLQSKDVFNKLVPLWQLHLYFTKNGHPDFYPDVMEYLRNNAGNYGGNDTVKYQFEFVKACCDVTKTDLTDFFEKWGFFKPGKFHIGDYAQYDFNVTPEMVEETKKWIAGKGYPKPETDITELSE |
| Peptidase M60 domain-containing protein | B | 441 | Akkermansia Muciniphila , Synthetic Construct | GGGGGPDYLYAEYRALPSPRQTGKNLRIGDGFSKYDNMTGVYLEKGRHVVLVGKTEGQEISLLLPNLMRKPAEGVQPTKDPNGWGLHKKQIPLKEGINIIDVETPANAYISYFTEDAGKAPKIPVHFVTGKANGYFDTTRGDTNKDWVRLLDQAVSPIMDARGKYIQVAYPVEFLKKFTKDRGTELINAYDKLIGIQYQLMGLDKYGKIPENRVLARVNFNYYMFRDGDGVAYLGNDGTMRMVTDPENVLKGDACWGFSHAVGHVMQMRPMTWGGMTEVSNNIFSLQAAAKTGNESRLKRQGSYDKARKEIIEGEIAYLQSKDVFNKLVPLWQLHLYFTKNGHPDFYPDVMEYLRNNAGNYGGNDTVKYQFEFVKACCDVTKTDLTDFFEKWGFFKPGKFHIGDYAQYDFNVTPEMVEETKKWIAGKGYPKPETDITELSE |
| PSGL-1-like bis-T glycopeptide | F | 10 | Akkermansia Muciniphila , Synthetic Construct | TEAQTTPPPA |
| PSGL-1-like bis-T glycopeptide | H | 10 | Akkermansia Muciniphila , Synthetic Construct | TEAQTTPPPA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2022-02-15 Deposition Author(s): Borges, R.J. , Clausen, H. , Companon, I. , Corzana, F. , Garcia-Garcia, A. , Gonzalez-Ramirez, A.M. , Hurtado-Guerrero, R. , Liao, Q. , Narimatsu, Y. , Rovira, C. , Taleb, V.