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FASTA Sequence PDB Format mmCIF Format
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7YRH

Cryo-em structure of compact coxsackievirus a16 empty particle in complex with a neutralizing antibody 9b5

PDB DOI: 10.2210/pdb7yrh/pdb

Classification: STRUCTURAL PROTEIN
Organism(s): Coxsackievirus A16

Deposited: 2022-08-10
Deposition Author(s): Cong, Y. , Liu, C.X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.35 Å

7yrh
Literature

Cryo-em structure of compact coxsackievirus a16 empty particle in complex with a neutralizing antibody 9b5

Cong, Y. , Liu, C.X.

Primary Citation of Related Structures: 7YRH


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid protein VP1 A 297 Coxsackievirus A16 GDPIADMIDQTVNNQVNRSLTALQVLPTAANTEASSHRLGTGVVPALQAAETGASSNASDKNLIETRCVLNHHSTQETAIGNFFSRAGLVSIITMPTMGTQNTDGYANWDIDLMGYAQLRRKCELFTYMRFDAEFTFVVAKPNGELVPQLLQYMYVPPGAPKPTSRDSFAWQTATNPSVFVKMTDPPAQVSVPFMSPASAYQWFYDGYPTFGEHLQANDLDYGQCPNNMMGTFSIRTVGTKKSPHSITLRVYMRIKHVRAWIPRPLRNQPYLFKTNPNYKGNDIKCTSTSRDKITTL
Genome polyprotein B 310 Coxsackievirus A16 ENSNSASEGSTINYTTINYYKDAYAASAGRQDMSQDPKRFTDPVMDVIHEMAPPLKSPSAEACGYSDRVAQLTIGNSTITTQEAANIVIAYGEWPEYCPDTDATAVDKPTRPDVSVNRFFTLDTKSWAKDSKGWYWKFPDVLTEVGVFGQNAQFHYLYRSGFCVHVQCNASKFHQGALLVAVLPEYVLGTIAGGTGNENSHPPYATTQPGQVGAVLTHPYVLDAGIPLSQLTVCPHQWINLRTNNCATIIVPYMNTVPFDSALNHCNFGLLVIPVVPLDFNAGATSEIPITVTIAPMCAEFAGLRQAVKQ
Capsid protein VP3 C 242 Coxsackievirus A16 GIPTELKPGTNQFLTTDDGVSAPILPGFHPTPPIHIPGEVRNLLEICRVETILEVNNLKTNETTPMQRLCFPVSVQSKTGELCAAFRADPGRDGPWQSTILGQLCRYYTQWSGSLEVTFMFAGSFMATGKMLIAYTPPGGSVPADRITAMLGTHVIWDFGLQSSVTLVVPWISNTHYRAHARAGYFDYYTTGIITIWYQTNYVVPIGAPTTAYIVALAAAQDNFTMKLCKDTEDIEQTANIQ
The light chain of the antibody 9B5 E 214 Coxsackievirus A16 DIQMTQSPASLSVSVGETVTITCRASENIYSNLAWYQQKQGKSPQLLVYAATNLADGVPSRFSGSGSGTQYSLKINSLQSEDFGTYYCQQFWDTPFTFGSGTKLAIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
The heavy chain of the antibody 9B5 F 218 Coxsackievirus A16 EVQLQQSGPELVKPGASVKMSCKTSGYTFTENTMHWVRQSHGKSLEWIGGIYPKNDDTKYNQKFKGKATLTVDKSSSTACMELRSLTSEDSAVYYCARGDYENYFYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKL
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-08-10
Deposition Author(s): Cong, Y. , Liu, C.X.